Gloeophyllum trabeum: GLOTRDRAFT_81230
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Entry
GLOTRDRAFT_81230 CDS
T03130
Name
(RefSeq) Nrap protein
KO
K14544
U3 small nucleolar RNA-associated protein 22
Organism
gtr
Gloeophyllum trabeum
Pathway
gtr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
gtr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
GLOTRDRAFT_81230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gtr03009
]
GLOTRDRAFT_81230
Ribosome biogenesis [BR:
gtr03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
GLOTRDRAFT_81230
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nrap_D4
Nrap_D5
Nrap_D3
Nrap
Nrap_D2
Nrap_D6
Motif
Other DBs
NCBI-GeneID:
19309057
NCBI-ProteinID:
XP_007870062
JGI:
Glotr1_1_81230
UniProt:
S7RBK4
LinkDB
All DBs
Position
Unknown
AA seq
1117 aa
AA seq
DB search
MSSSFKLQIDALLPNVRPKSSRIPPLDRFLFALHSVLTSLSSREAQHPLEAAHKLQDKSI
SVPYPDPRPTKETNWKVGFEKPYDVNVVGSWANKCSVKGQDGTKFRVDLAVEMPAALFQE
KDYLNGRFFHKKAYYLACLADAVVDKQSGLNATVEYRSVSGDPRLTTLLVRSPQGSVSDK
SETDFTPLNAEIQIIPTLPNPPPFPLHRLSPTQCNLRLSSESQTPTPLYNTALLLSCTPK
AHLLAVHKLKADVPAFADALTLLRVWANQRGYGEGSRLCVRGFEGRGAWWTGVLELLVRG
EEGAGGKGGAAVGKRKPVGKGLSSYQMFRAALDFLAKHDFEDEAVVVKTNGGHRYPADEY
KSSHDAVFVDSVSLVNLLAGVPLSSLDMLKHDAQLTLDILGNSAAVNDAFNETFLKDQRS
VPSRFDAFISVDIASAKLDNISSITVADQGLRVTAILNSLASVLRRGLGNRAKAVAILHP
TSTPRSVSESHPSSPHTVCIGIIYNTEHAFRLVEHGPAVDDPDTSFAAFWGDKAELRRFK
DGSITQSVVWDVQNSDERARIPVRIVEYLLDRHFSVSTKAVKTWQARFDSILRLPESISS
MIQQQGATGGFKNALAAFDGLLRALKSSEELPLSILNVHPVSEYLRYTSVFSPLPVPPEL
SSVLPKCARYVPVFEVILEFEKSGRWPDDLRAIQKIKLAFFERIAAALMNHGGFRRAVVV
LGDGVCTSEIQDQARLEIVTDQGWVFSARIWHDREAILLDRIINDKSHISKAVRKTAEGQ
SKDRQLALEAREVYLRRFIHAPKHHRAIANMSHRFSAYAGTARLVKRWLSSHWLLHGHIS
EEVVEIICASVFLGGRQYGDGPSVPGSKERGFARVVEFLKDWKIEEGLFVPLYAAGAGEQ
ASPEEGANHIGVLDKTGAWSVRTEEDPEGRMWTSHGPDSVVALRVKALAKATWNLLQSME
SRRLDVKTLFLHPTDDYDFLVKLDASVLPRYHQNISADPKTWSRGSGYANLQPRDEEPSR
PGRDPAQLLFDDLQRVYQDSFKVFYDCYGGNTFGAVWDPSVKKRRPFRVMGGFSSIPVKK
EEKSKEKGTVTLNESAILSEITRIGAGLVNDVVVQSS
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtagcttcaagctgcagatcgacgcactcctgccaaacgtccgaccaaaatca
tcccgcataccccctctcgaccgctttctcttcgccctccactccgtgctcacatccctc
tcctcacgagaagcgcaacatcctctcgaagctgctcacaaattacaagacaagagtata
tcagtgccctaccctgacccccgaccgacgaaggagacgaattggaaggttggcttcgaa
aagccgtacgatgtgaatgtggtcggcagctgggcgaacaagtgtagcgtgaaaggtcag
gatgggacgaagttccgtgttgacttggctgtggagatgcctgcggcccttttccaagaa
aaggattacttgaatggcagattcttccacaaaaaagcctattatctggcctgtctcgca
gacgctgtagtggacaagcagagcggcctgaatgccactgtagagtaccgctcggtatct
ggagaccctcggctgaccacactcctcgtgcgctcgccacaaggctcggtatcagacaag
tccgagacagacttcacccccctgaacgccgaaatacagattatccccaccctgcccaac
cccccgcccttccctctccaccgcctctcccccacccaatgcaacctccgtctctcctcc
gagtcgcagaccccgacgcccctctacaacaccgccctcctcctgtcctgcacgcccaag
gcgcacctgctcgcagtgcacaagctcaaggcggacgtgcccgcgttcgcggacgcgctc
acgctgctgcgcgtgtgggcgaaccagcgcgggtacggcgaggggagcaggctgtgcgtg
cgggggttcgaggggcgcggcgcgtggtggacgggcgtgctggagctattggtgaggggc
gaggagggggcgggtgggaaagggggagctgcggtggggaagaggaagccagttgggaaa
ggcttgagttcgtaccagatgttcagggctgcgctcgattttctggccaagcacgacttc
gaagatgaagcggttgttgtgaagacgaatggagggcatcgatatccagcagacgaatat
aaatcatctcatgatgccgtattcgtggattccgtatccttggtcaacctgttggcaggc
gtccctttgtcatcgttggacatgctcaagcatgatgctcaactgacgctagacatcctg
ggtaactccgctgccgtgaatgatgcattcaatgagacgttcctcaaggatcagcgcagc
gttcccagccggttcgatgcattcatcagtgttgatatcgcttctgccaagctcgataac
atctccagcatcacagtagccgaccaaggcttaagggtgaccgctatcctaaactctcta
gcatcggtacttcgtcgggggttgggtaaccgcgcgaaagctgtcgccatcttgcaccct
acctcgacgccccggtccgtctccgagagccatccgtcctctcctcacaccgtctgcata
ggcataatatacaacacggaacacgccttcaggctcgtagagcacggccccgcggtagac
gatccggatactagctttgctgcgttctggggcgacaaggccgagctccggcggttcaag
gacggcagcatcacgcagagtgtcgtctgggacgtgcagaattcggacgaacgcgcgcgg
atacctgtcaggatcgtggagtacttgctggatcggcactttagtgtctcgacgaaggcg
gtgaagacatggcaggctcgcttcgactcgattttgcgactgccggagtcgatttcgtct
atgattcagcaacagggcgccactggcggtttcaagaatgccttggctgcctttgacggg
ctgctgagggccctaaagtcgtcggaagaattaccgctatccatcctcaatgttcaccca
gtctcggagtatctgcgctatacaagcgtcttcagccctcttcccgtaccccccgagctc
tcttccgtcttgccaaaatgcgctcgttacgtacccgtcttcgaggtgatactggaattc
gaaaagtcaggccggtggcccgacgacctgcgcgcgatacagaagatcaagctcgcgttc
ttcgagcgcatcgccgcggcgctcatgaaccacggcgggttccgccgagccgtcgtcgtg
ctgggtgacggagtctgcacgtctgaaatccaggaccaggcgaggctggagatcgtgacc
gaccagggctgggtgttctccgcgcgaatatggcacgacagggaggcgattttgctggat
aggattatcaatgacaagtctcatatatcaaaggcagtgaggaagacggctgagggtcag
tctaaggacagacagctggcgttggaggcccgcgaggtttaccttcggcgctttatccat
gcgcccaagcaccatcgagccattgctaatatgtctcaccggttctcagcttatgctggg
actgcgaggctggtgaagcgatggctgtcgtcgcattggctgctgcatgggcatatcagc
gaagaagtcgtggagataatttgcgcgagcgtcttcctcggcggtcggcaatacggcgac
gggccttcggtgccaggtagcaaagaacggggattcgcacgagtggtcgagttcttgaag
gactggaagatcgaagaaggtctttttgtccctctgtacgccgccggtgctggtgaacaa
gccagcccagaggagggtgccaatcatatcggcgtgctcgacaagactggtgcctggagt
gtaaggacggaggaagacccagaagggcgaatgtggacctcgcatggccctgatagcgtg
gtggctctgagagtcaaggctcttgccaaggctacgtggaatctcctgcagagtatggag
tctcggagattagacgtcaaaactctgttcctacatccgacggatgactacgattttctg
gtgaagctcgacgccagtgtcttgccgagataccatcagaatatctcagctgatccaaag
acctggagcaggggctctgggtatgccaatctgcagccgagagacgaggaaccatctcgg
cctggaagggatccagcccagttactctttgatgaccttcagagagtatatcaggattct
ttcaaggtgttctacgactgctacggggggaacaccttcggtgcagtctgggatccatct
gtcaagaaacggagacccttcagggtgatgggcggtttctcaagtattcctgtcaagaag
gaggagaagtccaaggaaaagggcacggttaccctgaacgagtccgctattttgagtgaa
atcacaagaataggcgccggtctggtcaatgatgtagtcgtgcaatcttcatga
DBGET
integrated database retrieval system
