Gloeophyllum trabeum: GLOTRDRAFT_90007
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Entry
GLOTRDRAFT_90007 CDS
T03130
Name
(RefSeq) hypothetical protein
KO
K24155
rabconnectin-3a
Organism
gtr
Gloeophyllum trabeum
Pathway
gtr04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
gtr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
GLOTRDRAFT_90007
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gtr04131
]
GLOTRDRAFT_90007
Membrane trafficking [BR:
gtr04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
GLOTRDRAFT_90007
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
GLOTRDRAFT_90007
RAVE complex
GLOTRDRAFT_90007
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rav1p_C
Motif
Other DBs
NCBI-GeneID:
19309230
NCBI-ProteinID:
XP_007860915
JGI:
Glotr1_1_90007
UniProt:
S7QLU2
LinkDB
All DBs
Position
Unknown
AA seq
1351 aa
AA seq
DB search
MLELLQAYTGCPVTGLQHLVLPSQTLLLYPLGDSLVLLDARTLHLVRALAFWEAFPRTLH
TKESIRCVSVDGSMKLVIAAMGSRIAAWSMSGVQSGVWRVHSTLILPEDQEVTALDCKSG
IPHSTCLREFLSFDSGLLAIGSTSNLSVYTLVLENDLPTWSHKWRVTFSTPARVRFSPSL
MYFATTSLYDNTVRVYLTTSGRQTQGIPHPRAVTNVQWRDAPQASSSARDDLILYTVTVD
SVLRIFLPVIDAPQHLQLHATIDLFSSLPFSLASQSDPNLTASSIFWLDRTVVGDALNDI
LKNTGKDEEGRFRRLKDIKDEGWDLFLRVLGDGSLVVSGVANVDRRPPTLLKQFTLIQSS
PGCLPRAPQHIYLVRDPGRTSLTLVTAPPLATYQLSLPEFFEAKAEGLTNVQQGPESFEG
ESARVIRFIRTPEGRGLAVLRDGNVGQTFRLKGRGSAILKQAAWHAADHAVVLAYGKMYA
TYTCAEQMLTLHSQPPVHLSLPPVTSMFVIPSSAHQSSIVAIASDHSVFHIHISYSPQPS
LVMHSHTSLPLASPPMIILPVDPMAWSLPYMATGQSIHDVLLSISETGELAFWSFDEREE
SDTGWRCTGTVRTGRKNIRMARCSSAKKSALGPDGEELTIWDSKESEFASGLEYRQVLRI
AEPVNDLDWSSTPDSQSILAVGFSHRVELLCQQRMSYFDDNPRWDLCWRIDLSEMIPHGI
SDSIWLANGSLLVGAGHHMLLYGQPQLDRREDVSESLFEYVARLNGPLVEYHPQMLLQCL
LWGKLELVKEIIVNLAKHLREERDGAPDYRDYRSLPLELFLHDDRWEDKVRHSKSSAYSS
LFDISSSTKEPQESDFDRQLVKQLIEDLETYPPPHFTPNEQAHLSVMIETTLEVEEQRRA
LDANGLRYLAMMRSFQILNRRASEPSSPQSNGVIPRQTGRRERLRYRDMIWAFHSESQEL
MLSASLSSCGGKMTWNEARSLGVFIWLTSADTMRSHMEVIARNQYLAGDNRDPTACSLFY
FALGKVKLVHGLWRTAAWHPEQTIMLKFLSNDFTQPRWRTAALKNGYALLAKQRYEYAAA
FFLLGGSLKDAVNICIRQLRDFQLAVALARVVEQGDRGPVLRDVLENTVIPLAFKDGNRW
LGSWAFWLLHRRDFAVRILVAPLRDTATAFNSQSTEVGEPHYDDPSLALLFSQLKLKTLQ
TAKGTSEISGQMEFNFVLQVARVFCRLGCHVLALNLLQTWSFARPSTAVHEDMPGEKVLP
PSPTASRRSLFPLEPALRRTSSIMIDMDIPSAAPTRSASPERRGGATLPIPEKEEMKEEP
DFLARKAGLGNLMKSAKKDVKVPEFDMNAFF
NT seq
4056 nt
NT seq
+upstream
nt +downstream
nt
atgctggagctcctgcaagcgtacacaggatgtcctgtgacaggcctccagcacttggtc
ctgccctcccagaccctcctgctttatcctctaggagattcgttggtgctgctggacgca
cgtacacttcaccttgtccgcgcactggcgttctgggaagcgtttcctaggacattgcat
accaaggagagcataagatgtgtctcggtggatggcagcatgaaactggtcattgcggcc
atgggctcgcgaatagctgcctggtccatgtcaggcgtccagagtggtgtctggcgcgtt
cactctaccctgatactaccagaagaccaagaggtaacggcattggactgtaaatctggt
ataccgcattctacttgtctcagagagtttctctcatttgactcagggcttcttgccatt
ggtagtacatcaaacctgtccgtctatactctagttctagaaaatgatctaccaacctgg
tctcacaaatggagggtcaccttttcaacgcccgcgcgtgtgcggttctcgccatctctg
atgtactttgccacgacgtccttgtatgacaacactgttcgtgtgtacctaacaacatca
ggccgtcagacccaaggaatcccccatccccgagcggtcaccaatgttcagtggcgagat
gcgcctcaagcatctagcagcgcaagggatgacttaattctgtacaccgtcaccgtcgac
tccgtcttgaggatcttcctgcccgtcattgacgcaccccagcatttacagttgcatgcc
acgatcgatttgttctcttcgttacccttctcactggcttcccaatcggacccgaacctg
acagcgtccagcatattctggcttgatcgaacagtagtcggtgatgcgctgaacgatatt
ctgaagaacactggtaaagatgaagaaggccgattcaggcggctgaaggacatcaaggat
gagggatgggatctcttccttcgagtgcttggtgacggttctctggtcgtatcaggcgtt
gcaaatgtagatagacgccctccaactctccttaaacagttcactcttatccaatcctct
cccgggtgcttaccacgtgcaccgcaacatatctacctcgtacgagatcctggacgaacc
tcgcttaccctggtgactgcccctccacttgcgacttatcagctatcgttaccagagttt
ttcgaggcaaaggccgaagggcttacgaatgtccaacaaggtcctgagagcttcgaaggc
gaatcagcaagagttatccggtttattagaacgccggaaggcagaggtctggccgtgctc
cgagacggtaacgtcggacaaacattccgactcaaaggacgaggttctgcgatattaaag
caggccgcctggcacgccgcagatcatgctgtagtgctagcctacgggaaaatgtacgcc
acctatacctgtgcggagcaaatgttgaccctgcattctcaaccgcctgttcacctctca
ctgccgccagtcacatcgatgttcgtgataccgtctagtgcccaccagtcctccatagtc
gccatcgcgtcggatcactccgtcttccatatccatatctcatactccccccaaccgtcg
ctagtcatgcattctcatacatctttgccccttgcgtctcctccgatgataattctgcct
gtcgatcccatggcgtggagtcttccgtacatggctaccggacaatccatccatgatgtg
ctcctcagcatatctgaaactggtgaactagcgttctggtcctttgacgaacgtgaagag
tcggatacggggtggagatgtaccgggacggttagaacagggaggaagaacattagaatg
gctcgctgtagctcggcgaaaaaatcagctttaggaccagacggagaagagttgaccatc
tgggattccaaggaatccgagtttgcttcaggtttagaatatcgacaggtgctgcggatt
gccgagccggtcaacgatttggattggtcgtccacaccagatagccaatctattcttgcg
gtcgggttcagccatagagtagaattgctctgccagcaaagaatgtcatacttcgatgat
aacccgaggtgggatttatgctggagaatagacctatcagaaatgatacctcatggaatc
agcgattcgatttggttagcgaacggatcgctgctggtgggcgcaggccatcatatgtta
ttatatgggcaaccgcaacttgatcgaagagaagacgtatcagagagtctcttcgaatat
gtagctcggctcaacggtcctttagttgagtatcatccccagatgctcctccaatgtctg
ctgtggggaaagctagagcttgtgaaagagatcatcgttaatctggctaagcacctcagg
gaggaacgcgacggagccccggactaccgcgactacaggagccttccgctcgagttgttt
ctgcatgacgatcgttgggaagacaaagtgcggcactcaaagagctccgcatattcgtcg
ctgtttgatatatccagctccacgaaagagcctcaagagtcggactttgatcggcagcta
gtgaagcagcttatagaagacctagagacttatccacccccacattttacccccaatgaa
caggcacatctctcggtgatgatagaaactactctcgaggtagaagagcaacggcgcgcg
ttagatgccaatggtcttcgctatcttgccatgatgcgttctttccagatcctgaaccga
cgtgcgtcggagccaagcagtcctcagtccaacggagtgataccaaggcaaactggtcgg
cgggaacgtctccgctatcgggacatgatctgggcattccatagcgagagtcaggaactc
atgttatccgcctcactgtcttcatgtggtggcaaaatgacgtggaatgaggctcggtct
ctcggggtcttcatttggcttacgtccgcggacacgatgagatctcatatggaagtgatc
gccaggaaccagtatctagcaggagacaaccgagatcccacggcttgctccttattttat
tttgcgttggggaaggtgaagttggttcatggcctatggcgcacagctgcttggcatccc
gagcagactattatgctcaagttcctgtccaatgacttcactcagcccagatggcgcacg
gctgctctgaagaatggctatgcattgctagcgaagcagcgctatgagtatgccgcggcg
ttcttcctcctaggcggcagtttgaaagatgccgtgaatatctgtatcaggcagctgcgc
gatttccaactcgccgtagctttggctcgagtggtagagcagggagaccgtggccctgtc
ctacgagacgtacttgaaaacacggttatccctttggccttcaaggatggtaaccggtgg
ttgggtagttgggcattctggttactgcatagacgggacttcgctgtcagaatactggtg
gcgcctctcagggataccgctacagcattcaatagtcagagcactgaggtcggagagcct
cattacgacgatccgagcctggcacttctgttctcgcagctaaagctaaagactttacaa
actgccaaggggaccagcgaaatctcaggccagatggaattcaactttgtcctgcaagtc
gcgcgagtattctgcagattaggttgtcacgtcctggcactgaacctactgcagacatgg
tcgttcgcccgaccttcaacagcagtgcacgaagatatgccaggtgagaaggtactacca
ccaagtcccaccgcgtctcgccgctccctcttccctctggaacctgcattgcgaagaacg
tcatcaatcatgatcgacatggacatcccttctgctgcaccgactcgctcagcttctcca
gagcgtaggggcggcgcgactctacccataccggagaaggaagagatgaaagaagaaccg
gacttcctcgctcgcaaagcaggcctgggaaacttgatgaaatcagccaagaaggatgtc
aaagtaccagagttcgatatgaacgcctttttttga
DBGET
integrated database retrieval system