Guillardia theta: GUITHDRAFT_103160
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Entry
GUITHDRAFT_103160 CDS
T02925
Symbol
RAE1_2
Name
(RefSeq) putative Rae1, nuclear pore complex component
KO
K14298
mRNA export factor
Organism
gtt
Guillardia theta
Pathway
gtt03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gtt00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
GUITHDRAFT_103160 (RAE1_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gtt03019
]
GUITHDRAFT_103160 (RAE1_2)
03036 Chromosome and associated proteins [BR:
gtt03036
]
GUITHDRAFT_103160 (RAE1_2)
Messenger RNA biogenesis [BR:
gtt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
GUITHDRAFT_103160 (RAE1_2)
Chromosome and associated proteins [BR:
gtt03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
GUITHDRAFT_103160 (RAE1_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
EIF3I
Beta-prop_WDR19_1st
WDR90_beta-prop_4th
Beta-prop_CAF1B_HIR1
Beta-prop_Vps41
Pep3_Vps18
eIF2A
Motif
Other DBs
NCBI-GeneID:
17308037
NCBI-ProteinID:
XP_005838223
JGI:
Guith1_103160
UniProt:
L1JT35
LinkDB
All DBs
Position
Unknown
AA seq
379 aa
AA seq
DB search
MEVQLLPYAVLRGWGAEYRKESMGSLTSDKKGYNPENDPEAEHIPNDGITCMKFSPKAMA
PNNFLAVTTWEGELRCYEVDGSTGKTKPVGMQKHEKPAMCCAWKLDGGGVLSGGADGKGM
LWDIRAGTWTQIAMHDAPISGIFHSELPSPCYITGSWDRTLKFWDARNPSASPIGVLQVP
DRVYAMDVVDHVMIVATAERHVLVYDLRNPAQPFRQKFSPLKYQTRCVAIFPDKTGFCVG
SIEGRVGVEHISDADLPKNFAFKCHRQNTNAKDPELYAVNTIAFHPLGTFATAGGDGSFN
FWDKDAKHRLKAFQRADQPITSSHFNHDGSLFAYSVCYDWSKGVDEFLKLNAEQRKGRIM
IHLVKQECQPKKDVNTKRW
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atggaggttcaactcttgccgtatgcagtgctgaggggctggggtgcggagtaccgcaaa
gagtcgatgggctctctaacatctgataagaagggatacaaccctgagaacgacccagag
gcggaacacattcccaacgacgggataacgtgcatgaagttctcgcccaaggcgatggca
cctaacaactttttggccgtgacgacgtgggaaggggagttgcgatgctacgaggtcgat
ggatcaacaggcaagacaaagcccgttggcatgcagaagcatgagaagccggcaatgtgc
tgcgcgtggaagttggatggcggtggcgtattatcaggaggagctgacggcaagggaatg
ctgtgggacattcgagctggtacttggactcagatcgccatgcacgatgctcccatctct
gggatctttcactctgaattgccatccccttgttacattacgggatcttgggatcgtact
ctgaaattctgggatgcaagaaatccctcagcttctccaattggcgttctacaagttcca
gacagagtttatgcgatggatgtcgtggatcatgttatgatagttgcaactgctgaaaga
catgttcttgtatacgacttacgcaaccccgcccagccatttcgtcaaaagttctcgcct
ttgaaataccaaacccgatgtgtggccatattccctgacaagaccgggttctgtgtcggg
agcattgaggggcgggtaggcgttgagcatatcagcgatgctgaccttcccaagaacttc
gcattcaagtgtcatcggcaaaacacaaatgccaaggacccggagctatatgctgtgaac
actattgcattccatcctttgggaacattcgccacagcgggcggggatggatctttcaat
ttttgggacaaggatgcaaagcacaggctgaaagcattccagagggcagatcagccaata
acatcctcacatttcaaccatgacggatcactctttgcatactccgtgtgctacgattgg
agcaagggagttgatgaattcttgaagctgaatgccgagcagaggaaagggagaatcatg
atacacctcgtgaaacaagaatgccagccgaaaaaagacgtgaacaccaaacgctggtga
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integrated database retrieval system
