KEGG   Guillardia theta: GUITHDRAFT_103637
Entry
GUITHDRAFT_103637 CDS       T02925                                 
Name
(RefSeq) hypothetical protein
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
gtt  Guillardia theta
Pathway
gtt03018  RNA degradation
gtt03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:gtt00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    GUITHDRAFT_103637
  09123 Folding, sorting and degradation
   03018 RNA degradation
    GUITHDRAFT_103637
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gtt03019]
    GUITHDRAFT_103637
   03041 Spliceosome [BR:gtt03041]
    GUITHDRAFT_103637
Messenger RNA biogenesis [BR:gtt03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     GUITHDRAFT_103637
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     GUITHDRAFT_103637
Spliceosome [BR:gtt03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    GUITHDRAFT_103637
SSDB
Motif
Pfam: LSM RimP_C Hfq
Other DBs
NCBI-GeneID: 17307195
NCBI-ProteinID: XP_005837384
JGI: Guith1_103637
UniProt: L1JQ55
LinkDB
Position
Unknown
AA seq 98 aa
MNADKKQAVLDLSRHVDQKVRVKFSGGREVEGRLKGFDTLVNLVLDECIEYIRDPDDPYK
LTNETRQLGLIVCRGTAVTLVCPCDGMMEIANPFISAE
NT seq 297 nt   +upstreamnt  +downstreamnt
atgaacgctgacaaaaagcaagcggtattggacctcagcagacatgttgatcagaaagtt
cgcgtcaaattttcaggaggtcgtgaagtggagggcaggctgaaggggtttgacacgctg
gtgaatctggtgttggatgagtgcatcgagtacatccgcgatcctgacgacccctacaag
ctcaccaatgaaactcgacagctggggttgattgtgtgcagaggaactgctgtcacacta
gtttgtccatgcgacggtatgatggagattgccaaccctttcatttcagctgagtga

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