Guillardia theta: GUITHDRAFT_104200
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Entry
GUITHDRAFT_104200 CDS
T02925
Name
(RefSeq) hypothetical protein
KO
K13174
THO complex subunit 5
Organism
gtt
Guillardia theta
Pathway
gtt03013
Nucleocytoplasmic transport
gtt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gtt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
GUITHDRAFT_104200
09122 Translation
03013 Nucleocytoplasmic transport
GUITHDRAFT_104200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gtt03019
]
GUITHDRAFT_104200
03041 Spliceosome [BR:
gtt03041
]
GUITHDRAFT_104200
Messenger RNA biogenesis [BR:
gtt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
GUITHDRAFT_104200
Spliceosome [BR:
gtt03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
GUITHDRAFT_104200
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
PelG
SPP
p25-alpha
Motif
Other DBs
NCBI-GeneID:
17306516
NCBI-ProteinID:
XP_005836785
JGI:
Guith1_104200
UniProt:
L1JNR2
LinkDB
All DBs
Position
Unknown
AA seq
610 aa
AA seq
DB search
MKVAEAQPLNSRQLLLQSINFIRSKLLEAAPFENEQMELKYHDYFLQSLVCIENVGLTAS
MVVTTVYHIGILSMRNSEKGISSFDDYLFVLRFFVLIGVWIGMFLTSRMSQSQRISLAIL
LKRVLYVRFFVFMTELLMMNPNLEHVKLISLVLSMVFLVGSYSYRELIFFNEAEIMAGQV
KELERFMRTTKKLRGMLELEGSGKDVCGQDGRGPVRKANRDAPEAADRMLSAAEAERIKT
DQLQNLQYQKIHLSRELQVCLNYKGHAFDDLISEEDFEEMTTPEERGGPRGSHEYELNRL
NKEHNQREEMIKSLKQQELRKQLYEGKLTSQRKFLDGLQAHLDAIYNVAEPVRKEFNKSA
PLPSLHSDLAATASLLPSPLYSIYYQAHSYDVAFGEDVKVSIEGDLTEAYESAGNCCSSY
SWDRWKEAKVVKKKNNDMEENEEGSLTKPHPLFLKLRIPPKADDSPSAAPTITLTFSYLT
TLQIVVVQHELSSKEKEPSFLQDLFSNDSGIYSPLVANDYLPGRPYKWAQTIGCMTFPAR
DSGDSSNIKAPLLRDSGITFSKLVKALRERCLVWTQVKQMMQELAKMNNKDLPKVPGCEA
LTGSGAALQG
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtcgccgaagcccaacccttgaattctcgacaactgttgttgcagagcataaac
ttcatcaggagcaagctcctggaggcagctccttttgaaaatgagcagatggagctgaag
tatcatgactactttctccagtctctggtgtgtatagagaatgtaggtttgacggcgagt
atggtagtaactactgtgtaccacattggcattctaagtatgaggaacagcgaaaagggc
atcagcagcttcgatgattacttgtttgtgctacgcttcttcgttctgattggcgtctgg
atcggaatgttcttgacttcgcgcatgtcacaaagccaaaggatctcgttagctatcctg
ctgaagcgagtgctgtatgtgagattttttgtctttatgacggagctgctcatgatgaat
cccaaccttgagcatgtgaaattgatttcgctcgtcttgtccatggtgttccttgtgggt
tcatactcttacagggagctcatattcttcaatgaagcagagatcatggcagggcaggtg
aaggagctcgagcgcttcatgcggacaacgaagaagctgcgagggatgctcgagcttgaa
ggaagcggcaaggatgtgtgtggtcaagatggcagaggcccagtgcgcaaggccaacagg
gacgcgcccgaggcagccgaccggatgctctcggccgctgaggcagaaaggatcaagaca
gatcaacttcaaaacctccagtatcagaaaatccatctcagcagagagttgcaggtgtgc
ttgaattacaagggccatgcattcgatgacttgatatctgaagaagattttgaagaaatg
acaacccctgaagagcgtggagggcctcgcgggtctcacgagtacgagctgaatcgtttg
aacaaagagcacaatcagagggaagagatgatcaagtctttgaaacaacaagaacttcgc
aagcaattgtacgagggcaagctgacttcccagcggaagtttcttgacggattgcaagct
catctcgatgcgatctacaatgttgcagagccagtgaggaaggagttcaacaagtcagcg
ccccttccctccctgcactcggacttggctgcgacagcatcgttattgcctagccctctg
tactcgatatactatcaggctcattcgtatgatgttgcgttcggagaggatgtgaaagtg
agcatcgaaggcgacttaactgaggcttatgaaagcgcaggcaactgctgttcctcctac
tcctgggacagatggaaagaagcgaaggttgtgaaaaagaagaataatgatatggaggaa
aatgaagaaggatccttgacaaaaccacatccgttgttcttgaagctcagaattcccccg
aaggcagacgattctccatcggctgctccaacgattactcttaccttctcgtatttgaca
acgctacagattgtggttgttcagcatgagctcagctccaaggagaaggagccctccttc
ctccaagacctcttttctaacgattcaggaatctactctccactggtcgcaaacgactac
cttcccggacgaccatacaaatgggcgcagactataggatgcatgaccttcccagcgaga
gactcgggcgacagcagcaacatcaaggctccgttgctccgggactcggggatcaccttc
tctaagctcgtgaaagcgttgcgagaacgttgcttggtgtggacacaggtgaaacagatg
atgcaagagctcgccaagatgaacaacaaggatctgccaaaagttcctggttgcgaagcc
ttgacaggctcgggggcagccctccagggatag
DBGET
integrated database retrieval system