Guillardia theta: GUITHDRAFT_106397
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Entry
GUITHDRAFT_106397 CDS
T02925
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7
KO
K03015
DNA-directed RNA polymerase II subunit RPB7
Organism
gtt
Guillardia theta
Pathway
gtt03020
RNA polymerase
gtt03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gtt00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GUITHDRAFT_106397
09124 Replication and repair
03420 Nucleotide excision repair
GUITHDRAFT_106397
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gtt03021
]
GUITHDRAFT_106397
03019 Messenger RNA biogenesis [BR:
gtt03019
]
GUITHDRAFT_106397
03400 DNA repair and recombination proteins [BR:
gtt03400
]
GUITHDRAFT_106397
Transcription machinery [BR:
gtt03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
GUITHDRAFT_106397
Messenger RNA biogenesis [BR:
gtt03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
GUITHDRAFT_106397
DNA repair and recombination proteins [BR:
gtt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
GUITHDRAFT_106397
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SHS2_Rpb7-N
S1
Motif
Other DBs
NCBI-GeneID:
17304482
NCBI-ProteinID:
XP_005834829
JGI:
Guith1_106397
UniProt:
L1JI86
LinkDB
All DBs
Position
Unknown
AA seq
183 aa
AA seq
DB search
MFFHVKRLSKNLQIEPKYYGPSLAVVIKQRLQDEVENSCSERYGIVLKVFNIDVDNLEGK
IMPTGMHPGGTAVFTVPYDAIVFKPFKGEVLNGVVKSSAAQGLFVQCGPLQVFIAKANLA
DDNNGLEWRGDNTPPCWMSRDERIVIGDKTHLRLRILGTRIQNDISQCSAVGTILDDYLG
PID
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgttctttcacgtgaagaggctgtcgaagaacctccagatagagccaaagtattatggg
cccagccttgcggtcgtgatcaagcagaggctacaggatgaggttgagaactcttgcagc
gagcgatatggcatcgtcttgaaggtcttcaacattgacgtagacaacctggaaggcaag
atcatgcccacgggtatgcatccgggaggaacggctgtcttcacggtcccttatgacgcg
attgtcttcaagcccttcaaaggagaggtgctcaatggagtggtgaagagctcggccgcc
cagggtctgtttgtgcagtgcggccctttgcaggtcttcatcgcaaaagcaaacctggcg
gatgataacaatgggttggaatggcgcggcgacaacactcctccgtgttggatgtcacga
gatgagcgaatagtgatcggagacaagacccacctccggttgcgcatactgggaacgaga
attcaaaacgacatctcccaatgtagtgcagtagggacaatcctggacgactacctgggc
ccgatcgactaa
DBGET
integrated database retrieval system
