Guillardia theta: GUITHDRAFT_107116
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Entry
GUITHDRAFT_107116 CDS
T02925
Name
(RefSeq) hypothetical protein
KO
K15216
RNA polymerase I-specific transcription initiation factor RRN3
Organism
gtt
Guillardia theta
Brite
KEGG Orthology (KO) [BR:
gtt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gtt03021
]
GUITHDRAFT_107116
Transcription machinery [BR:
gtt03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
GUITHDRAFT_107116
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRN3
Pol_alpha_B_N
Motif
Other DBs
NCBI-GeneID:
17303874
NCBI-ProteinID:
XP_005834186
JGI:
Guith1_107116
UniProt:
L1JFC5
LinkDB
All DBs
Position
Unknown
AA seq
591 aa
AA seq
DB search
MTLGILLTKATCGDSSELQQYIVGALHKKAQGNSTAYGEMIEVIDAERDDAELAVLLTCL
IRCTSCLQRKHHSSLIHSIFAHSWRTNRALTPHLEALAVNSVSANADLLSLILFELVKQL
TLFNLNPTGNDASSAIDSAGKEAEHPSSDAADVQKAKDVHTVVRRVLETFPTGIMCYLDL
LVNSFPHHRKDLSELVCFLGNMLHVTEYLPQLQDGILNHVVDRLIRLDVEIDPEAISVGH
DANSTEGLFDIDIDDSSTSERSENMKAVEKLDAMMTLMFRFFHKNLGKRAGHDRDQVFSV
LLRIFDSRVLTTFRSKYVQFLCFYSCHFRERYSREFLQYLMTKVVERSNPDNERHAAGSY
LGSFLARARFVKLPMVQKSLSLLTKWILEYIDEVSPTVHEPDPYQHSLFYGLVQALLYVL
CFRVPQLVADERNYDTFLRFELQLDVITRCSLNPLKVINQNVSKQFVRICVKYKLLQAEM
LRNLLAYNQSIVVNGVLEFEQEHSFFPFDNYNLPLSRTFIDGANEASSSQLGSSVEDAEG
VAMSLNSQLSLSDQGPHNSFSPSWKPMSFSPPHEEKMNGMRMLAESQMRAR
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgactctcggcatcctgttgaccaaggccacgtgtggagactcttctgagttgcagcag
tacatcgtgggtgccttacacaagaaggctcaagggaacagcactgcatatggggagatg
attgaagtcatcgacgcggagagggatgatgccgagctcgcagtcctcttgacctgtctg
atccgatgcacatcctgcctgcagaggaagcatcactcctccctgatccactccatcttc
gcgcattcttggcgcaccaacagggctctcaccccccacctggaggccttggcagtgaac
tcagtgtcggccaacgcggacctgctgtctctgatcttgttcgagcttgtcaagcagctc
accttgttcaacctgaaccccacgggcaacgacgcaagcagcgccatcgatagcgcgggc
aaggaagccgaacatccttcgagcgatgctgctgacgtccagaaggccaaagacgtgcac
acggtagttcgtagggtgctcgagacttttcccacggggattatgtgctaccttgacctg
ctggtcaactcgtttcctcaccatcggaaggatctcagcgagcttgtctgcttcctcgga
aacatgctccacgtgaccgagtacctgccgcagctccaggacgggatcctcaaccacgtg
gtcgatcggctgattcggctggacgtcgagattgaccctgaagcaatctccgttgggcat
gacgcgaacagcacagaaggactgttcgacatcgacatcgacgactccagcacctctgag
aggagcgagaatatgaaggcggtggagaagctggacgcaatgatgactctgatgtttcgt
ttcttccacaagaacctgggcaagcgggcaggacatgaccgggatcaggtcttcagcgtc
ctgttgcgcatctttgactcccgcgtcctcactaccttccgctccaagtacgtccagttc
ctctgcttctactcctgccacttccgcgagcgttattcccgggagttcctccagtacctc
atgaccaaggtagtcgagaggagcaacccggacaacgagcggcatgctgctggctcgtac
cttggaagctttctggctcgagcgaggttcgtcaagctgcctatggtgcagaaatctctc
tcgcttctcaccaagtggatcctcgagtatatcgacgaggtctcccctactgtacatgag
ccggacccgtaccagcacagcttgttctacggtcttgtgcaggctctcctctacgtcctc
tgcttccgcgtgccgcagcttgtggcggatgagcggaactacgatactttcttgcgattc
gaactgcaactggacgtgataacaaggtgttccttgaatcccctgaaggtcatcaaccag
aacgtgtcgaagcagtttgtgcggatctgtgtaaaatacaaactcttgcaagctgagatg
ctgcgcaacctcctggcatacaaccagagcatcgtggtgaatggggtcttggagtttgag
caagagcactcatttttccccttcgacaactacaacctccctctgtctcggaccttcatc
gatggtgccaacgaggcgtcctcgagccagctggggtcgtcggtggaggatgcagaggga
gtggcgatgtcgctcaattcgcagctctccttgagcgatcagggtcctcacaatagcttc
tcaccctcttggaagccgatgagcttcagccctcctcacgaggagaagatgaacggcatg
cggatgcttgccgagtctcagatgcgggccagatag
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