Guillardia theta: GUITHDRAFT_107458
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Entry
GUITHDRAFT_107458 CDS
T02925
Name
(RefSeq) hypothetical protein
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
gtt
Guillardia theta
Pathway
gtt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gtt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
GUITHDRAFT_107458
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gtt03041
]
GUITHDRAFT_107458
03009 Ribosome biogenesis [BR:
gtt03009
]
GUITHDRAFT_107458
Enzymes [BR:
gtt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GUITHDRAFT_107458
Spliceosome [BR:
gtt03041
]
Complex A
U1 snRNP components
U1 related factors
GUITHDRAFT_107458
Complex B
GUITHDRAFT_107458
Ribosome biogenesis [BR:
gtt03009
]
Eukaryotic type
Pre-60S particles
Helicases
GUITHDRAFT_107458
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Mucin
DUF7761
Motif
Other DBs
NCBI-GeneID:
17303435
NCBI-ProteinID:
XP_005833656
JGI:
Guith1_107458
UniProt:
L1JDT3
LinkDB
All DBs
Position
Unknown
AA seq
555 aa
AA seq
DB search
MPHRTLQTLKLARANLMHMKRLLYAAFLVLCFCVSITCSTLSSGLLLHADDIRLRGGHEQ
SAIDSTMIKSITQRTLDTRGKRMYLESRGAQDDDKPPSLGMDGVSPSEYRSKFEIQVKDP
KSSIPLDPIQTFAKAPFAQEILTEVRAAGFQHPSPIQAQCWPYLAAKRDLVAVAKTGSGK
TCGYLFCAFMKILKLCPDLEMKRRGSRSSKYSNSPVRSHALVLAPTRELVVQITAEAQKF
GKSCGIVNVAIFGGVGRGMQMRQLNMGAHLIIATPGRLNDFIDCGTARLDQVEYVVLDEA
DRMLDMGFEPQIKKIFKTLPAHPVRQTITFTATWPKGVQKLAATYLHEAVQVNVGGVDEL
IVNSDVVQEFHHVRSHTKEAKLLEVLQTISPDPSACDASIIIFVNTKRNCDLISRKLRQQ
SWRARSIHGGKLQDERLRALNDFTSGRAQVIVATDVAARGLDIKGVSHVINFDLPSSGAE
DWVHRVGRTGRAGAKGHAHTFICDGDAGSAGDLIKILTKANQPIPDFLTHLASLRRRSSM
SRSGYSGRDRYGRSR
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgccccatagaaccctgcaaactctgaagctcgcaagggccaacctcatgcatatgaag
cgcctcctctacgctgctttcctcgtcttgtgtttctgtgtgagcataacctgtagcaca
ctctcctccgggttgttgttgcatgcggacgacatcagacttcgaggagggcacgagcag
tctgccatcgacagcaccatgatcaagagcataacgcagcggacactggatacgagaggg
aagcggatgtacttggagtcacgaggagcacaggatgacgacaagcctccctcgctgggg
atggatggagtgagtccctcggagtacaggtccaagttcgagatccaggtcaaggatccc
aagagctcgataccgttggatcccatccaaactttcgccaaggcgcctttcgctcaggag
atcctgactgaggtgagagctgctgggtttcaacatccttctcccatccaagctcaatgc
tggccgtacctggcggccaaaagagacctggtggcggtagcgaagacagggagtgggaag
acgtgtgggtatctgttctgcgccttcatgaagattctcaagttgtgccctgatcttgag
atgaagcgtcgagggtcccggtcgtccaagtattccaactcgccagtacgctctcatgcc
ctcgtgctggcaccgactagggagctagttgtacagatcacagcagaggcgcagaagttt
ggaaagtcatgcggtattgtaaacgttgcgatctttggaggtgttggaaggggcatgcag
atgagacaactgaacatgggagctcacctcatcatcgcaactccaggaaggctcaatgac
ttcatagactgcggcacagctcggctggaccaagtggagtatgttgtgctcgacgaggca
gacaggatgttggatatgggattcgagccacagatcaagaagattttcaagacgcttcca
gcacatccagtcagacagacaatcacctttactgctacttggcccaaaggagtgcagaag
cttgcggcgacgtacttgcatgaggccgttcaagtcaatgttggcggagttgatgagctg
atcgtcaacagcgatgtagtgcaagaatttcatcacgtgagatcgcataccaaggaggcg
aagctgcttgaagtgcttcaaaccatctctcctgatccatctgcatgtgatgcgagcata
attatttttgtcaacacaaagcggaactgcgaccttatctcgagaaagctgagacaacag
tcatggagagcgcgaagtatccatggaggcaagttgcaggatgaaaggctccgagcactc
aacgacttcacgtctgggagagcgcaggttatcgtagcgacagacgtggctgctaggggc
ctggacatcaaaggcgtgtcgcacgtcatcaacttcgatcttccctccagcggggcggag
gattgggtgcatcgtgtcgggcggacaggccgtgctggcgccaagggacatgctcacacc
ttcatctgcgatggagacgcaggaagcgcaggcgatctgatcaagattctgaccaaggcg
aaccaacccatccctgacttcttgactcatctcgcctccctgagacgacgttcatccatg
agccgctcaggatactcggggagggacaggtacggcaggagcaggtga
DBGET
integrated database retrieval system
