Guillardia theta: GUITHDRAFT_108531
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Entry
GUITHDRAFT_108531 CDS
T02925
Name
(RefSeq) hypothetical protein
KO
K06100
symplekin
Organism
gtt
Guillardia theta
Pathway
gtt03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gtt00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
GUITHDRAFT_108531
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gtt03021
]
GUITHDRAFT_108531
03019 Messenger RNA biogenesis [BR:
gtt03019
]
GUITHDRAFT_108531
Transcription machinery [BR:
gtt03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
GUITHDRAFT_108531
Messenger RNA biogenesis [BR:
gtt03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
GUITHDRAFT_108531
U7-dependent histone pre-mRNA processing factors
GUITHDRAFT_108531
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SYMPK_PTA1_N
P19Arf_N
GRIP
Motif
Other DBs
NCBI-GeneID:
17302254
NCBI-ProteinID:
XP_005832634
JGI:
Guith1_108531
UniProt:
L1JC11
LinkDB
All DBs
Position
Unknown
AA seq
645 aa
AA seq
DB search
MEQAVSLLHAAKAANLSEKESKFDNLLTYVRGVRAAPALFEELLPLVLEMQSEDNPHVRS
FVVQFIEESCKRLPQLLPQAVTALLEFSRSEDVNVLTKAMKAVAVLFRKTLVFVCSEEYE
VDNEDAIATWNCIKESFAGMRVHVSHASAKVRNSTVLLIQCIAIALGVSEQNDNPDIQGE
DENDEESWTINCIPPCHPVLDFAELKALGQDCVNQLLSLLDPKTSTPFQTMLCAINCLGR
IARNQPVFLGEIEPVLSAACRNITNVDAWQLSSLKSTVKSTMLALLKLPRCSAYAAVLVD
RLISLGASTQAEAARRIMEKEKQKTRHSAPGRNVVKRQADPRLQDASANKRARNAPAPLI
ELERIPQGKPPEEWPPELVTELVLAAMVNFPPALPPHLIDVADTPLGMWPERLAFPGAHA
KPMNEASRDAEAAEDASAASVSSIRSKALQSARPLKKETIQQLMQEAVLRVLHGESAAWS
IRNNVLAKLIAMGDVCEQKGPRERYWKLLHAVIEGLLNHSDGANAQGAGETRFLTKLLAE
VPAIQEQTMSIVSALCDNDNVKLRQVGLSCLRALIINRPACRRECLQKLLAYTIWEDDSF
RSTAIRLIANKLFSVSFLTADIQSFAVANMRKACKASATIGAGEE
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atggagcaagctgtatcgttgctccatgccgctaaggcggcgaatctttccgagaaggag
tcaaagttcgacaatcttcttacctatgttcgaggagtgcgagcagcgcctgcgctgttt
gaggagctccttccccttgtcctggaaatgcagtctgaagacaatccccatgtccggtca
ttcgtcgtgcagttcatagaggagagctgcaagcgattgccacagcttcttcctcaagct
gtcacggcgctactcgagttttcacgcagtgaggatgtcaatgtcttgaccaaggccatg
aaagctgtagccgtgctctttcgaaagacgctggtttttgtctgcagcgaggagtatgaa
gttgacaacgaagacgcgatcgctacttggaactgcatcaaggaatcattcgctggcatg
agagtacacgtttcccacgcaagcgccaaagtcaggaactcaacagtgttactaattcag
tgcattgcaatcgcgttgggagtttccgaacaaaacgacaatcctgacatacaaggagag
gatgagaatgatgaggaatcctggactattaattgtatccctccatgccatcccgttctt
gatttcgcggaactcaaggctctgggacaagactgtgtaaatcaacttttgagtctccta
gaccccaaaacatctactccctttcaaactatgctctgtgccatcaactgccttgggcgt
atcgcacgcaatcagccagtcttcttaggagagatcgagcctgttctttccgctgcgtgc
cggaacatcacaaacgtggatgcttggcagctttcgagcctcaagagtaccgtcaagtca
accatgctcgcgctcctcaaactccctcgatgctcggcttacgcggctgttctcgtggat
cggctcatttctcttggggcctccactcaggctgaagcagcgcgacgaatcatggagaaa
gagaagcagaagacgcggcactcggcacctgggaggaatgttgtcaagcggcaggctgat
ccccgtctgcaagatgccagtgcaaacaagcgagcgaggaatgctccagcccctctcatt
gagcttgagagaatacctcaaggcaaaccccccgaagaatggccgcccgagcttgtcacc
gagcttgtgctggctgcgatggttaacttccctcctgctctgccgcctcacctgatcgac
gttgccgacactcccctgggcatgtggccagagcggttggcgtttcccggtgctcatgcg
aagccgatgaacgaggcgtcgcgggatgcggaggctgcggaggatgcaagcgcagcgagc
gtgtcgagcatccggtcgaaggcgctgcagagcgctcgaccgctcaagaaggagacgatc
cagcagctgatgcaggaagccgtcctccgagtccttcacggggagtcagcggcgtggagc
ataagaaacaatgttctcgcgaagctgatcgctatgggggacgtttgcgagcagaagggt
ccgcgagagcgatactggaagctgctgcacgccgtcatcgagggtctgctgaatcacagc
gatggagcgaacgctcagggagcgggggagactcgcttcctgaccaagttgctcgctgaa
gttccggcgatccaagagcagacgatgagcatcgtgagcgccctctgcgacaacgacaac
gtcaaactcagacaggtcggactctcctgcctcagagctctgatcatcaacagaccagcg
tgtaggagggagtgcctgcaaaaactcttggcatacactatatgggaggatgatagcttc
cgatccacagccattcgtcttatcgccaacaaactttttagcgtctcctttctcacggca
gacattcagagcttcgccgtcgcgaacatgcggaaggcgtgcaaggcgagcgcgacgatc
ggggcgggcgaggagtga
DBGET
integrated database retrieval system
