Guillardia theta: GUITHDRAFT_113844
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Entry
GUITHDRAFT_113844 CDS
T02925
Name
(RefSeq) hypothetical protein
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
gtt
Guillardia theta
Brite
KEGG Orthology (KO) [BR:
gtt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gtt03016
]
GUITHDRAFT_113844
Enzymes [BR:
gtt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
GUITHDRAFT_113844
Transfer RNA biogenesis [BR:
gtt03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
GUITHDRAFT_113844
Prokaryotic type
GUITHDRAFT_113844
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_4
Lactamase_B_2
Lactamase_B
Motif
Other DBs
NCBI-GeneID:
17296905
NCBI-ProteinID:
XP_005827086
JGI:
Guith1_113844
UniProt:
L1IV18
LinkDB
All DBs
Position
Unknown
AA seq
530 aa
AA seq
DB search
MYVRRNTKGNDPDNNGPNKKRKEGVGSEQLDVKDGSQLQRYVQILGTDSSDCCPSILVVT
EACRIVFNAGDAQRLCSQYQVRLNKLEHLFLTELHADTLGGLLGMYLTLSDSGVKKLSVH
GPRGVTHFLRSGGRPESELVPVEIPSGDVQPVVLDHVSILPLPTSEVEKSERVEGVKEES
DGEGEEADGKKKRNFVPSSTLAVSYLLRFADEAGRMDVNKALSLGVPKGPLLGQLKAGKS
VTLTCGTIVEPQDCVEDAVEGPLIGIWFCPDVSSITKLAERMKVGEVPPPPLKSPHTSKP
KKKKLALVIHMSSNHILLHETYKQLVEEFCENDAKHVILNSHTQIICQLNKVSPVFFPIP
KDSEKKVEQRMQALDQIKRCDWSTSDVNKNLWPASIMLKFGIKPAKYSGLYHYDPSVQLK
SVSTEIDDEIICKQTTAATNIPPSLQSISRQSAEVLILGTAASLPGKYRNVSAIFVDLFD
RGGILLDCGEGTLGQLARFYGDEELREIIAKTKCVWISHMHADHHLGELL
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgtacgtgagaagaaacacgaaaggaaatgatccggacaacaatggcccgaacaagaag
cggaaggaaggggtaggttctgagcagctcgacgtgaaagatggtagccaactgcagcga
tacgtccagatcctcgggaccgactcgagcgactgctgcccatccatcctcgtcgtcaca
gaggcttgcaggatcgtcttcaatgccggcgacgcacagaggctctgttcccagtaccaa
gtgcggctgaacaagctggagcacctgttcctcacagagctacatgctgacacgctggga
gggctgttggggatgtacctgacgctgtctgactcgggagtgaagaaactttctgtccac
gggccgaggggggttacgcatttcctgagatcaggtggcaggccagaaagtgagctggtt
cctgttgagatcccgtcgggcgatgtgcaacctgtagtcctcgatcatgtctcgatcctt
cctctcccgacaagtgaggttgagaagagcgagagggtcgagggtgtgaaggaagagagt
gacggagagggggaagaggctgatggcaagaagaagaggaactttgtcccctcctctaca
cttgcagtcagctacctgttgaggttcgcagacgaagcaggaaggatggatgtcaacaag
gcactctccctgggtgtacccaaaggtcccctcctgggacagctcaaggcgggaaagtct
gtgaccttgacctgcgggacgattgttgagccgcaggactgtgttgaagacgccgtagag
ggccctctgatcggcatctggttttgtccggacgtcagctccatcacaaagctcgcagaa
aggatgaaagtcggcgaagtacctcctcctcctctcaagagccctcacactagcaaaccc
aagaagaagaagcttgctcttgtgattcacatgtcttcgaatcatatcttgttacacgag
acctacaaacagcttgttgaagaattctgtgagaacgatgcaaagcacgtgattctcaac
agccacacacagattatctgtcagctcaacaaggtttctccagttttctttcctattcca
aaagacagtgagaagaaggtcgagcagagaatgcaagctctggatcagatcaagagatgt
gattggagtaccagtgatgtcaacaaaaatctctggccagcttccatcatgctcaagttt
ggcatcaaaccggcaaagtactccgggttgtatcactatgatccatcagtccaactcaag
agcgtgtccactgagattgatgatgaaataatttgcaaacaaacaacagctgccacaaac
attcctccgtcactgcaatcaatatcaaggcaatctgcagaagttttgatccttgggacc
gctgcttcactcccggggaagtacagaaacgttagcgcgatctttgtagatctgttcgac
aggggggggattttgcttgactgcggagaagggaccttgggacaactggctagattttat
ggagatgaggagctgcgggaaataatcgcaaagacgaaatgcgtttggatcagccacatg
catgccgaccatcatcttggtgagctgctttaa
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