Guillardia theta: GUITHDRAFT_114953
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Entry
GUITHDRAFT_114953 CDS
T02925
Symbol
VPS35
Name
(RefSeq) vacuolar protein sorting 35
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
gtt
Guillardia theta
Pathway
gtt04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
gtt00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
GUITHDRAFT_114953 (VPS35)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gtt04131
]
GUITHDRAFT_114953 (VPS35)
Membrane trafficking [BR:
gtt04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
GUITHDRAFT_114953 (VPS35)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
17295603
NCBI-ProteinID:
XP_005825826
JGI:
Guith1_114953
UniProt:
L1IRF8
LinkDB
All DBs
Position
Unknown
AA seq
728 aa
AA seq
DB search
MSEAMARWLEEGKAVVKQQAFLMKRALDNTNLRDGLKYGSNMLCELRTGLLSPKNFYELY
IMVADEMRHLEQYFLEEWKRGRRMVELYELVQHAGNIVPRLFLLITVGSVYIRSKEAPAR
DILKDLVEMCRGVQHPMRGLFLRNYLLQCARDKLPDIGSEYGSDVADGIDFLMHNFAEMN
KLWVRMQHQGPVRDRERRERERLDLRILVGTNLVRLSNLEGIDADMYKTQVLPRILEQVI
SCKDQIAQQYLMEVIIQVFPDEFHLRTLEEFLATCPQLQSGVDVKAILVALMNRLAAFAK
AEPAQIPSDVDMLAIFHSHVSKMTGSNTLELAASLDLQVALVNFALGFAPDRLDFVDQTL
AVCAQLLQSNGETRLSGPAKHSTVQLLKTPLISNGQPLTILALPHYAGLMIYLPLESRSE
VATLAVRMLLSSKTPVDSLLNFIQPLVKDVEEDGPNELDEEEMETEQNLIAALIHNFKSS
DTDTQYAILVGARKHFGQGGPRRIKFTLVPMVVRALELAERVHEEEEGGGERAGTISAKK
VFGFTLETIKGLASAEPVMALRLFLQASLIANKCGEDKIAYELVSQAFILYEDEVSDSKI
QMELVLEAAGTLFLLNNLDPEDYDTLITNTTKHAARLLKKPDQCRAVYTCSHLFWNAGVK
YEDGRTFQDGKRVLDCLQRSLKIADVCMQSSNNVNLFIEILDRYLYYYEAGNEKVTVKYI
QVNQCSFS
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaggctatggcacgatggctggaggagggcaaggctgttgtgaagcagcaggcc
ttcttgatgaagcgagctctcgacaacaccaacttgcgtgacggtctcaagtacggaagc
aatatgctgtgcgagctcagaaccggtcttctctctcccaagaatttttacgaactttac
atcatggttgcggatgagatgagacatctggagcagtacttcttggaggagtggaagaga
gggaggagaatggtcgagctgtacgagctggtgcagcatgctgggaacatagtcccgagg
ttgtttcttctcatcacagttggaagcgtgtacatcaggtccaaggaggcccctgcacga
gacatcctcaaggatctggtggagatgtgccgaggagtccagcacccgatgcgagggctg
ttcttgaggaactacctgcttcaatgcgctagggacaagctgcctgacatcggctcggag
tacggcagtgacgtggcagacggcatcgacttcctcatgcacaacttcgcggagatgaac
aagctgtgggtccgcatgcaacatcaggggcccgtgcgcgacagagagaggagggagaga
gagcgactcgacctgcgcatcctcgtgggcacgaacctggtcaggctctctaaccttgag
gggatcgatgcagacatgtacaagacacaagttctcccccgtatcctggagcaagtcatc
agctgcaaggaccagattgcccagcagtacctcatggaagtgatcatccaggttttcccc
gacgagttccaccttcgcaccctcgaggagttcttggctacctgccctcaacttcagtcc
ggggtcgacgtcaaggcgatcctcgtagctctcatgaaccgtctggccgcgtttgccaag
gccgagcccgcacaaattccttccgacgtcgacatgcttgccatcttccattcccacgtc
tccaagatgactggttccaacaccctcgagctcgccgcctccttggaccttcaggtcgcc
ttggtgaactttgcgctcggttttgctccggaccggctggactttgtggatcagacactg
gcagtgtgcgcccagctcctgcagtccaacggagagaccaggctgtcgggcccggcgaag
cactcgaccgtacagctcctcaagactcctctcatctccaacgggcaacctctcaccatc
cttgcccttccccactatgctggcttgatgatctaccttccccttgagtcgcgatccgaa
gtcgctaccctcgcagtcaggatgctcctctcctccaagactccagtcgacagcttgttg
aacttcattcagccccttgtgaaggatgttgaggaagacgggccgaatgagcttgacgag
gaggagatggagacggagcagaacttgattgctgccctcatccacaacttcaagagctct
gacacagacacccagtatgccatcctcgtaggagctcgcaagcacttcgggcagggaggg
ccccggcgcatcaagttcaccctcgtccccatggtcgtccgcgcgctggagctggcggaa
cgggtccacgaggaggaagagggaggaggagagcgggcagggacgatctcagccaagaaa
gtcttcggcttcacccttgagaccattaaggggctggcaagtgcggagccagtcatggcg
ctgcgactcttcctgcaggcgtctttgatcgccaacaagtgcggggaggacaagatcgcg
tacgagctcgtctcccaggcgttcatcctgtacgaggacgaggtgtcggactctaagatc
cagatggagttagttcttgaagcagcgggaacgctgttcctcctcaacaacctcgaccct
gaggactatgacacgcttatcaccaacacaactaaacacgcagcgagactgctcaagaag
cctgatcagtgcagagctgtgtacacatgctcacacctcttctggaatgctggagtcaag
tacgaagatggaagaactttccaggacgggaagagggtgttggactgcttgcagcggtcg
cttaagattgcagatgtttgcatgcagtcttccaacaatgtcaaccttttcattgagatt
ttagatcgttacttgtactactacgaagctgggaatgagaaggtcaccgtcaaatacatt
caggtcaatcaatgctccttttcctaa
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