Guillardia theta: GUITHDRAFT_116240
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Entry
GUITHDRAFT_116240 CDS
T02925
Symbol
Msh2
Name
(RefSeq) Msh2 mismatch repair muts-like protein, meiosis and mitosis
KO
K08735
DNA mismatch repair protein MSH2
Organism
gtt
Guillardia theta
Pathway
gtt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gtt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
GUITHDRAFT_116240 (Msh2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gtt03400
]
GUITHDRAFT_116240 (Msh2)
DNA repair and recombination proteins [BR:
gtt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
GUITHDRAFT_116240 (Msh2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
Motif
Other DBs
NCBI-GeneID:
17294350
NCBI-ProteinID:
XP_005824578
JGI:
Guith1_116240
UniProt:
L1IMW2
LinkDB
All DBs
Position
Unknown
AA seq
982 aa
AA seq
DB search
MSFRGKRTKAEKEPASVEAADDDQEDTNENMDGAEEAAQSQPSLQLDVGEAQGFIAFFKN
MPEPASRTIRFFYRKKEGEFYSCHGEDAVYIAQECFHTMSVLKHIGKNNELPAVAVSPSN
FNSFVVQLLTERQYRVEVWADVKGGKNGWTIIRQGSPGNLEEFEEIVFDTCGETQETPTV
VCVQIVSDGAGWRVGLAYCDNTLKIIGVCEFLDGDQLTNLEAALVRLGTKECVAAEDKMR
SPVEGKKLREIFDRCDVVLTERKSRDFSTKDINQDLNRLLGPESCKLINMEDENALSSAA
CLIRYLDLLSDERKFKLQELKLDRYMKLDKVEKDEAQDGNRNMSVYTLLNKCKTHIGSRL
LLRWIKQPLLDPQEIETRLDLVETFVNDVQLRQSMQEIYLRHVPDLARLARKFQALEDCE
TSKGSLMKEKMVDPLKSLEDDFKQYERLVEQSLDLEGIDNHEYRINPNYRQESRKGRDRE
EFEDSGGERERWMFYLTFHGAVLISSVWRRGRRSFEETLKGKRTDIQHEIFVDSSCSERK
KAANKLGLGEEKVKLERNKDKIYIFRITRKDEKVLRGKCGSFSVLETRKDGVKFTSTGLR
PLSERYKEADDSYSEIQTSLVEKVVEVISTYAPAVESLSEVIAEIDVLVSLAHVASNAPT
QYVRPLLSPAGQGDLILKESRHPCVEVMDDVSFIPNDIELLRSSSRLQIITGPNMGGKST
YIRQAGVIVLMAQIGSFVPCSSAEISICHSIHARIGAGDNQLKGVSTFMQEMLDTSSILS
SATDKSLIIIDELGRGTSTYDGFGLAWAIAEHIASSIRAPCLFATHFHELTELEGKAEAV
TNRHVTAHVADGKLTMLYQVRKGACDQSFGIHVAELAKFPEHVVEMARQKAEQLEMFGNA
SSSNEDAVGEPASKKRKTDEAAGEQGDHEEGSRLILQFLKDFSALPFDSLAPSEACLRVR
QMRDEMASKGNKFVESLLLQPA
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atgtcattccgaggcaagaggaccaaggcagagaaggagccggctagtgtggaggcggcc
gatgatgatcaggaggacaccaacgagaacatggatggcgctgaggaagcagcccagtct
cagcccagcctgcagttagatgtgggggaggctcaaggcttcattgcctttttcaagaac
atgccagagccggcgtcgaggacgattcgtttcttctacaggaagaaggaaggagagttc
tacagctgtcatggggaggatgccgtgtacatcgctcaggagtgcttccacaccatgtct
gttctgaagcacatcggcaagaacaatgagctgcctgctgtagcagtgtctccatccaac
ttcaacagcttcgttgtacagctcttgacagagcggcagtaccgcgttgaagtgtgggca
gacgtgaagggagggaaaaatggatggactattatccgacagggctcccccggaaacctc
gaggagtttgaggagatcgtctttgatacctgtggggagacgcaggagacgccgacagtt
gtttgcgttcagattgtctctgatggagccggttggcgagttggacttgcttactgcgac
aacaccctcaagattatcggagtttgcgagttcctcgatggggatcagctcaccaacctt
gaggccgcccttgtacgactggggacgaaagaatgtgttgctgcagaggacaagatgaga
tcacctgtggaggggaagaagttacgagagatcttcgaccgatgcgatgtcgtgctgact
gagagaaagtctcgagacttcagcaccaaggacatcaatcaagaccttaacagattgctc
gggccagagagctgcaagctcataaacatggaagacgagaacgcgttgtcgtcggctgct
tgtctgattaggtacctcgacctcctgagcgatgagaggaagttcaaactgcaggagttg
aaattggaccgctacatgaaactcgacaaggtagagaaggatgaggcgcaagatggaaac
agaaacatgtctgtctacacgctgctaaacaagtgcaagacgcatatcggctctagactt
cttcttcgatggatcaagcagccgctccttgacccgcaggagatcgagacgcgtctggat
ctggttgagacatttgtcaacgacgttcagctccgacagtccatgcaggagatctacttg
cgacatgttcctgaccttgctcgactcgccagaaagtttcaggctctagaggactgcgag
acaagcaaaggatcgctaatgaaagagaagatggtggatcctctgaaatctctggaggac
gacttcaagcagtatgagaggcttgtagaacaatccctcgacctcgaggggatcgacaac
cacgagtatcgcatcaaccctaactacaggcaagagagcagaaaagggagagatcgggaa
gaattcgaggatagcgggggagagagggagcgatggatgttttatctcacatttcatgga
gcagtcctgatctccagcgtctggcggagaggaaggaggagcttcgaagagacattgaaa
ggcaagaggactgacatacagcatgagatctttgttgattcttcctgcagtgagaggaag
aaagccgcgaacaagttgggactaggggaggagaaggtgaagcttgagaggaacaaggac
aagatttacatcttcaggataacgcgcaaagatgaaaaggttctgcgagggaagtgcgga
tctttcagtgtgctggagacaaggaaggacggagtgaagttcactagcacaggacttcgt
cccttgtctgaaagatacaaggaagcagacgatagctactcggagatccagacgtccctg
gtggagaaggtggtggaagtcatctccacctacgccccagctgtcgagagcttgagcgag
gtcatagcagagattgatgtccttgtctccctcgcccacgtggcctccaacgctccaacg
cagtacgttcgtcccctcctctccccagcaggtcaaggcgacctgatcctcaaggagtcg
cggcacccgtgcgtggaggtcatggacgacgtctccttcatccccaacgacatcgaactg
ctcagaagcagcagcaggttgcagatcatcacggggcccaacatgggaggaaagagcacg
tacatccgtcaggcgggtgtgatcgtgctcatggctcagatcggcagtttcgtcccctgc
tcctctgccgagatctccatctgccactcgatccacgcgaggatcggagcaggagacaat
cagctgaagggagtgagtaccttcatgcaggagatgctcgacacctcctccatcctcagc
tcagccaccgacaagtcgctcatcatcatcgacgagctgggaaggggaacgtcaacctac
gacggcttcggcctggcgtgggccatagccgagcacatcgccagctcaattcgagctccc
tgtctcttcgccactcacttccacgagctgacggagctcgagggcaaggccgaggccgtc
accaaccgccacgtgactgcccacgtggcggacggaaagctcaccatgctctaccaggtc
cggaagggcgcgtgcgatcagagctttggcattcacgttgcagagctggctaaattcccc
gagcacgtggtggagatggcgaggcagaaggcagagcagctggagatgtttggaaacgcc
tcgtcctctaacgaggacgctgttggggaaccagcctctaagaaacgcaagacggacgag
gcggcaggcgagcagggcgatcacgaggagggttcgaggctgatcctgcagtttctcaag
gatttctcagctctccccttcgactcactcgccccctccgaggcttgcctcagggtccgg
cagatgcgcgacgagatggcgagcaaaggcaacaagtttgtcgagagtctcctgctgcag
cccgcctga
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