Guillardia theta: GUITHDRAFT_118768
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Entry
GUITHDRAFT_118768 CDS
T02925
Name
(RefSeq) hypothetical protein
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
gtt
Guillardia theta
Brite
KEGG Orthology (KO) [BR:
gtt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gtt03009
]
GUITHDRAFT_118768
Enzymes [BR:
gtt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GUITHDRAFT_118768
Ribosome biogenesis [BR:
gtt03009
]
Eukaryotic type
Pre-60S particles
Helicases
GUITHDRAFT_118768
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTT_SPB4
ResIII
Utp25_C
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
17291754
NCBI-ProteinID:
XP_005822000
JGI:
Guith1_118768
UniProt:
L1IGQ9
LinkDB
All DBs
Position
Unknown
AA seq
668 aa
AA seq
DB search
MAAQRGAGGTWLREILRRQRRHEARRDSLAAGHVRSPRLAEGTRKTPKTPKTPKKLANLT
DPSSPAASSANAPSELVPHLSQDPFTSVLPSLSNFTLHALESLKFKYMAPVQKMVIPLLL
SSKDVVVEAPTGSGKTVAFLVPAFELLARSSDTLDKTDIGSLIIAPTRELALQIESLSAV
FSSHCSFPSHSFVGGSNETNNMRRFKELGGNVLIATPGRFIETISKKNLTGKGTSGIDAL
RSLQLLVLDEADRLLHMGFEQQLTRIFSLIPKQRSFTASDRTGLFSATMTSSLTELVRVG
MRNPCRVAVTVKGKEGQALTTPVELSHYYMEVAPRQRLNQLIHLLITLKEKKAGKIIIFF
LTCWAVDYFARILPKLKTCQGLHFVGLHGKLDQKKRSKAVEELRNSKEAILLCTDVAARG
LDFDDISWVIQFDPPQDPDFFVHRVGRAGRMGRRGKSVIFLAPSEIDYIQMVESRNMKLE
EIPCSADARDVLQEIRSLVREDRDLMRRGQRTFVSIGHGMSLGLLQLPYMRELLQAGATA
KRRMLLLPGFEPEEIDLDSIAFKDAKREKERQEQLKNEEDERDKQAKKRRAARNAQSWSK
KLDKMERRQKKKARKERVLTVPQVREEELSDDEIEQMRKEYALLKKMKKGKLPVNQLDQE
LDESANSL
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggcggcccagcgcggagcgggtgggacttggctaagagagatcctgaggaggcagcga
agacatgaagcgcgacgagattcccttgcagccggtcatgtcagatcgcccaggctggct
gaaggcactcgtaagacaccaaagacacccaaaacaccgaagaagctcgccaacctcacc
gatccttcgagcccagcagcctcaagtgctaacgctccctcggagctagtccctcacctc
tcgcaagatcccttcacctccgtccttccttctctctcaaacttcaccctccatgcgctc
gagtccctcaagttcaagtacatggcccctgtgcaaaagatggtcatccccctactcctg
tccagcaaggatgtggtggtggaggcaccgacgggctcgggcaagacagttgccttcctc
gtgccagctttcgagcttctcgctcgcagcagtgataccctagacaagactgatataggt
tctctgattatcgcgccgacccgagagcttgccttgcagattgaatcactgtctgccgtc
ttctcctcccactgctcctttcccagccactcgttcgtcgggggttcgaatgagacgaac
aacatgcggcgcttcaaggagctgggaggcaacgtcttgatcgcgacccctgggagattc
atcgagacgatcagcaagaagaacctgacgggaaaggggacgagtgggatcgacgcgctg
agatccctccagcttctcgtcctcgacgaggctgatagactgctccacatgggcttcgaa
cagcagctcacgaggattttctcccttatccccaaacagcgaagtttcaccgcctctgac
aggacgggcttgttttctgctacgatgacgtcatcgttgacggagctcgtgcgagtcggg
atgcggaatccttgccgagtcgcagtcactgtgaagggaaaggaaggacaagctctaacg
actccagtcgaactctcgcactactacatggaagttgctccccgtcagaggttgaatcag
ttgattcatctcctaatcactctcaaggaaaagaaggcggggaagatcatcattttcttt
ctgacgtgctgggctgttgattacttcgctcggatcctaccgaagctcaagacttgtcaa
gggctccactttgtgggtttgcacggcaagctggaccagaagaaacggagcaaagcagta
gaagagctgagaaactcgaaagaggctattctcctctgcacggacgtggcggccaggggg
ttggacttcgatgacatttcgtgggtcattcagttcgaccctccgcaagatcctgacttc
ttcgttcatcgcgtggggagagcggggaggatggggagacgtggaaaatctgttatcttc
ctcgctccgagcgagattgactacatccagatggtcgagtcgcggaacatgaagttagag
gagattccatgttctgccgatgctcgagacgtcttacaggagatcagaagtcttgtccgg
gaggatagagatctcatgaggagagggcagcgcactttcgtttctatcggtcacgggatg
agtctcgggctgctccagctcccctacatgcgcgaactccttcaagctggagccacggcc
aagcgacggatgctcttgctgcccgggtttgaacccgaggagatcgacttggacagcatc
gcgttcaaggacgcgaagcgggagaaggagcggcaggagcagcttaagaacgaagaggac
gagagggacaagcaggcgaagaagaggcgagcagcaaggaatgcacagagctggagcaag
aagctcgacaagatggagaggaggcagaagaagaaggccagaaaggagcgagtcctcacc
gtccctcaggtgcgggaggaggagctgagcgacgacgagatcgagcagatgcgcaaggag
tacgcgctgctcaagaagatgaagaaggggaaactgccagtgaaccagctggaccaggag
ctggatgagagcgcgaactccctgtga
DBGET
integrated database retrieval system
