Guillardia theta: GUITHDRAFT_119246
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Entry
GUITHDRAFT_119246 CDS
T02925
Name
(RefSeq) hypothetical protein
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
gtt
Guillardia theta
Brite
KEGG Orthology (KO) [BR:
gtt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gtt03016
]
GUITHDRAFT_119246
Enzymes [BR:
gtt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
GUITHDRAFT_119246
Transfer RNA biogenesis [BR:
gtt03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GUITHDRAFT_119246
Prokaryotic type
GUITHDRAFT_119246
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
LRR_6
Motif
Other DBs
NCBI-GeneID:
17291314
NCBI-ProteinID:
XP_005821576
JGI:
Guith1_119246
UniProt:
L1IE98
LinkDB
All DBs
Position
Unknown
AA seq
643 aa
AA seq
DB search
MQQMQISDKHRGMTYRLSLKLQFCKNARDIDVISILHALREAVEQQLVDVYRLYLHHLNL
TDAVMPELLSLLIFCEGTITEVHLSHNRITLKGARMLLEQDRETLLKFYPTERGNSYTPL
LVRLEHNEFDLLHLHLPPETFSTDVMPISVGYDGPAFRVPSWPPRTQPDDDCTIDLTPAA
FPPVSSFAAGVGSDYLPGPFPVNRELQANAYNFPSLQDNLCEEHRQEFEDKSYEQYAEYE
QYAEYEEYEEYEDAAYWGEEEREELSSVDGSEVSVPSETSTTGDCTSSRWEFETELLATP
VEFEDTYVKCLVNLSYLGHKFLGIQRNPYGPTVQQCLVEHMVLLGAIEEDRVEEFLIASR
TDKGVHAAQSLVVVTMKKIQCQSPIAAFIAKLNRSMKAKQQQVEVIAMRQIDPGSKLDTQ
LDTMCRTYQYIIPAFALAPLQREVAANSQQLYARMRTARLTAEELEHVQQVLSCFQRKDN
FVAFTDEAKADKYKETTREVSSFKIKELVYNNNIEYAVIEVEGKGFMYHQIRKMIGLSIL
IIQAGLDHRKSIEGVFRGVPLPGKDKVSSFRLAPAEPLFLDHINFKYDKIKSFLENPSIM
YKNDAFKRNTIIPHVYKESIKPILDFIQALEAAPKDNKEGGSR
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgcaacagatgcagatctccgacaagcatcgaggcatgacgtacaggttgagcctcaaa
ctgcaattctgcaaaaatgcgagagacattgatgtgatctcaatccttcatgcgttgcga
gaggctgtcgaacaacaactcgtagacgtttacagactttaccttcaccatctcaatttg
acggatgcagtcatgccagagcttctaagcctgctcatcttctgcgagggaactattacc
gaggtacacctgtcacataaccgcatcacactcaaaggggcaagaatgttgttggaacaa
gacagggagactctcttaaagttctatcccaccgagcgggggaacagctacaccccactg
ctcgttcgcctggagcacaacgaattcgatctacttcaccttcatttgcctcccgagacc
ttcagcaccgacgtcatgccgatctcagttggatatgatggcccagccttccgcgttcct
tcctggcctccacggactcagcctgatgacgattgcaccatagatcttaccccagctgca
ttcccccctgtcagctctttcgccgctggggtcgggtctgactacctgccgggccctttt
cccgtgaatcgagagctgcaagcgaacgcatacaatttcccctcattgcaagacaacttg
tgcgaggagcatcgacaggaattcgaggacaagagctacgagcagtatgcggagtacgag
cagtatgcggagtacgaggagtacgaggagtacgaggacgcagcgtattggggggaggaa
gagagagaggagctgtccagtgtcgatgggtccgaggtcagcgtgccaagcgagacgtct
acgacgggagattgcacctcgtcaagatgggagttcgaaactgaacttcttgccaccccc
gtcgaatttgaggatacctacgtcaagtgtctagtcaacctttcctacctcggacataaa
tttcttgggattcaaaggaacccgtacgggccaacggtgcagcaatgtttggttgagcac
atggtcttgctgggagcgatcgaagaggatcgggtcgaagagtttcttatcgccagtagg
acagacaaaggagtgcacgccgcgcagtctctggttgttgtgaccatgaagaagattcaa
tgtcagagtccaatcgcagcattcatcgcaaagttgaatcgttccatgaaggcgaagcaa
caacaagtcgaagtcatagcgatgcgtcagatcgatccaggctcaaagctcgacacacaa
ttagacactatgtgtcgcacctaccagtacatcatccccgccttcgctctcgcccccctc
cagcgggaggtcgctgccaattcgcaacagctgtatgcgcgaatgaggacagctcgactg
acagcggaggagttggagcacgtgcaacaggtcttgagctgtttccaacgtaaggacaac
ttcgtagccttcacggacgaggcgaaggcagacaaatacaaggagaccacccgagaagtc
tcatcgttcaagatcaaggagcttgtttacaacaacaacattgaatacgcagtcattgaa
gttgagggcaagggcttcatgtatcatcagatccgtaaaatgatcggactatccatcctc
atcattcaggctggtctggaccaccgtaagagcattgaaggagtgttcaggggagtgcca
cttcccggcaaggacaaagtctcctccttccgcctcgctccggccgagcctctcttcctt
gaccatatcaacttcaaatatgacaagattaaatccttcctggagaacccatcaatcatg
tacaagaacgatgctttcaagcgaaataccatcatccctcatgtctacaaggagtctatc
aagccgatcctcgacttcatccaagccttggaggcggcacctaaagacaacaaggaggga
ggatcacggtaa
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integrated database retrieval system
