Guillardia theta: GUITHDRAFT_119858
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Entry
GUITHDRAFT_119858 CDS
T02925
Name
(RefSeq) hypothetical protein
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
gtt
Guillardia theta
Pathway
gtt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gtt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GUITHDRAFT_119858
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gtt03019
]
GUITHDRAFT_119858
Enzymes [BR:
gtt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
GUITHDRAFT_119858
Messenger RNA biogenesis [BR:
gtt03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
GUITHDRAFT_119858
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
GUITHDRAFT_119858
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
PDE12-like_N
IG_AIR9
Motif
Other DBs
NCBI-GeneID:
17290693
NCBI-ProteinID:
XP_005820910
JGI:
Guith1_119858
UniProt:
L1IDM8
LinkDB
All DBs
Position
Unknown
AA seq
434 aa
AA seq
DB search
MFLASILSSSRREGVDAPKPRRQDPSRDFVNVWQEIGQSRIYVPQKQDVGRILKLECIPI
SQNGLYTGKSVSVESAEVMQATPVAPSRSMIEIPQPPNSFDPRSPKATFKVLTYNCLADI
YASPQVYPYTPSWALAWNYRKRNLLREILSYKADILALQEVQADHWKEFLEPEFDNAGYQ
GVYKQKTRESMGQDGKMDGCAILFRKSRFALIEKHALEFNHVAISRARGVGGQKSGLSEK
ALQCLLKGNVALVLVLEILVNGQPAGHMGRICVATTHIFQNQGFPNVKMWQVMTLVQELQ
KFTVPRQLPLVLTGDLNSQQDSAVYEFLQRGIISGNNAELKEDPQGILENADLRHNLQLR
DSYVVFGKDFYSNFTAAFVGILDYIWHTADRLRVTRVLEQIDHETLTAYTALPSPQYSSD
HIALMSEFELSLAR
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgttccttgcgtccattctttcatcctctaggcgcgaaggagtggatgcaccgaagccg
cgtcgacaggatccatccagagattttgtgaatgtttggcaggaaattggacaaagtcgc
atttatgttccacaaaaacaagatgtggggcgaatcctcaagctagaatgtattcccatc
agtcaaaatggcttgtacacaggaaagtcggtcagtgtggagtctgcagaagtgatgcaa
gcaacccctgtagcgccctcgaggagcatgattgagatcccccagccccccaacagcttt
gatcctcgctcaccgaaagccactttcaaagttctcacgtacaactgtttagcggacatc
tacgcgtctcctcaggtctatccttacacgccttcctgggctctcgcttggaactacagg
aagcgaaatttgcttcgagagattctgagctacaaggcagacatcttagcccttcaagaa
gtgcaagcggatcattggaaagagttcttggaaccagagtttgacaatgcggggtatcag
ggagtgtacaaacagaagacgagagaaagcatgggtcaggatggcaagatggacggctgt
gccatcttgttccgcaagtctcggttcgcactgatcgagaagcatgcgcttgagttcaac
cacgtcgccatttccagagccaggggagtcggaggacagaagagtgggctcagcgagaaa
gcgctgcagtgcttgctgaagggaaatgttgcgctcgtgctcgtgctagagattctcgtt
aacggacaaccggcagggcacatgggacgaatctgtgtcgcaacgacgcacatctttcag
aaccaaggctttcccaacgtgaagatgtggcaggtcatgacgctcgtgcaggagctgcag
aaatttacagtacctcggcaacttcctctagtcctcaccggagacctcaactcccagcag
gatagtgcagtgtacgagttccttcaacgagggatcatctccggcaacaacgcggagctc
aaagaggatccgcaggggatccttgagaacgcagacttgcgtcacaacctgcagctgcgg
gacagctacgttgtgttcgggaaagacttctactcaaacttcactgctgcttttgtcggg
atcctcgactacatctggcacacggctgaccggctgcgtgtcacgcgggtgctagagcag
atcgatcatgagacgctgacggcatacactgcgcttccgagccctcagtactcgtctgac
cacatcgcgctgatgtctgagttcgaactttctctggctcgatga
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integrated database retrieval system
