Guillardia theta: GUITHDRAFT_122469
Help
Entry
GUITHDRAFT_122469 CDS
T02925
Name
(RefSeq) hypothetical protein
KO
K12879
THO complex subunit 2
Organism
gtt
Guillardia theta
Pathway
gtt03013
Nucleocytoplasmic transport
gtt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gtt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
GUITHDRAFT_122469
09122 Translation
03013 Nucleocytoplasmic transport
GUITHDRAFT_122469
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gtt03019
]
GUITHDRAFT_122469
03041 Spliceosome [BR:
gtt03041
]
GUITHDRAFT_122469
Messenger RNA biogenesis [BR:
gtt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
GUITHDRAFT_122469
Spliceosome [BR:
gtt03041
]
Complex C
Other components
EJC/TREX
GUITHDRAFT_122469
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
GUITHDRAFT_122469
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
17288054
NCBI-ProteinID:
XP_005818310
JGI:
Guith1_122469
UniProt:
L1I661
LinkDB
All DBs
Position
Unknown
AA seq
1495 aa
AA seq
DB search
MQQPFVTEASVADWNDSKKQEFVTHVSGKVSAVRDASESDMILHRELYELLQMGMIGKLP
HDKLAECLSALGEKVSKTVIEESICDVLWLVGEEAVELKESKPELKNSLASIANQILSHK
VADADLVKERVSEEVLQEMALIRSAADAKARLQRLRTGKVYSQQKFNLMREESEGYAKLI
VDLEQGWALSADNVERVANNIQSLIAYFNLDPNRVLDIILDCFESCLNQPCYFILIKKFS
ATSLIQVLGFKFHGHVKAGTKPPSSLFELVATLCKNNVILVSDIYPYLSAEDEAIKTSFE
EHCDKVVEQVRKMRVFSLSKMEEGQKGEESPYDPAPHAQGGEENQKLVLTAAFLDVGDWR
SASYMLDVLSAVLPTSYPPVAKSLCKLIHRMIDPLYRSVIESSNLLGLLYKSPKMEQCTL
SEGIPVIAEFCDLERLMPFLRHLSIYLHEDVVLLVKLCRIVKECIKSHDCRPPEFVKEIL
LNFMGVLALLPANAAVASDMWECIKLFPYLDRYWIYSEMHWQLYFQHPQLLVARANAKEE
MRKLLKGLTKENVSKQRRHLARICHSNPLVVMEVVLDQIQEYESMIDVCKDALGYCGSLA
LDILSYLIVEELGGALYISKPFLQDDCANLARWLLNFSSFLSDVYLKYPRMEMKGLLQHI
FNRLQKDSLGELQILRDLVAKMAGIKFDVATISSEDIDSRSGGERLRLASEYPWPTEVLF
DRAEAAGDMGIGKLGGAAKIKAYQAAQKERSEACKWLINSLQESKLTVPLLVLIAQQTSG
CLFTAEAIKQDKIRFSSWLHVQCQETLLVYADFLWRRVPTKDIVGLLPGPMDLINQLQME
PALALFLLRPALKGSDTASVLDLSLHAKEILSSMPSNLKQSSPALFTTFWSLTLNDISVP
VETYENHERRLKKALADLEETDRLDPKAKDKDIKKWKENITLDLDKLEKERKKQVDNNKK
VMTRITEDKDALVEKDKSYKAIPCFFLQTCVFPRCVQSPEDAVFCARFIHLLHKIKTPNL
STILIYNMIITTFGPMVFSRTEQEAKHFGKFLSETLQMLNRWASTEEVFKKECENFPGFT
NVSQKPTKPEKIAFSSFQQCLRNWHKQLSKAFTTCLESSEGTEVHNALTILSELVGSTFP
VYDTFHAEVKQRVQKLIGEEQQFGQSIVVMARSVNARLQACESKMLKLPSKGKRKEAPEK
DKDAEKKPKVDKGGAAPPAKDVKQEPVRRVEKQEEDKKDVKRDSEQDNRKRNRAEDEGAK
VHAGKEEDPRAVRAKKEVGHSSKKEGSVSSQSKSSMDGRDGEGGRARDGKEEDRPSHLDE
RKEMKKEEPRVDTHKGRKEVDVRDLGKDRDGRDMGRGDGPPRGAPSNIRDDPQGQSRMGG
RLGSPSREIKGRADLDDKRDIKRLRREEDKDRHLPPAHPMDMRLDPRDSGRMMVNERPGP
GGMRMGGPPMDRMEPPGSRGGNFVDMRDRRERPRPGGPPGPGGSNMSGGNGMRGR
NT seq
4488 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagccgtttgtgacagaggcctcagtcgctgactggaacgacagcaagaagcaa
gagtttgtgacccacgtctcggggaaagtctcggctgtgcgagacgcgtcggagtcagac
atgattcttcaccgtgagctgtatgagctgctgcagatgggaatgatcgggaaacttccc
catgacaagctggctgaatgcctgagtgcgctgggtgagaaagtatccaagacagtgatc
gaggagagcatttgtgatgtgctctggttggtgggggaagaggcggtagagctgaaggag
tcgaagcctgaactgaagaacagccttgcttccatcgcgaatcagatcctgtcgcacaag
gtggctgatgcggacttggtgaaggagagggtgtctgaggaagtgctgcaagagatggct
ttgattaggagcgcggcggatgccaaggcaaggttgcagaggttgaggactgggaaggta
tacagccaacagaagttcaacctgatgcgggaggagagcgaggggtacgccaagttgatc
gttgacttggagcaagggtgggcgctgagcgcggacaacgttgaacgtgtggcgaacaac
atccagtcattgatagcatacttcaatcttgaccccaacagggtgttggatatcatcctc
gactgttttgagagctgtttgaatcagccctgttactttattctgatcaagaagttcagt
gcgacgtcgctgattcaagtgctggggttcaagtttcatggccatgtcaaggctgggacg
aagccgccgagctccctgttcgagctagtggcgacgctgtgcaagaacaatgtgattctt
gtcagtgacatctacccttacctgtccgctgaagacgaggctatcaagacttcatttgaa
gagcactgcgacaaagtagtggagcaggttcgaaagatgagagttttcagtttgagcaag
atggaagaggggcagaagggagaggaatcgccgtatgatcctgcgccgcacgctcagggt
ggcgaggagaatcaaaagctggtgctcacagctgcgttcctcgacgttggagactggaga
tcagcttcttacatgctcgacgtgctcagcgctgtcctcccaacgagctatcccccagtg
gccaagtccttgtgcaagctgattcatcgcatgatcgaccccttgtacaggagcgtgatc
gagtcctccaacctgctggggctgctgtacaagtcgcccaagatggagcagtgcactctc
tcggaagggatcccggtgatagccgagttctgtgacctggagagactcatgcccttcctc
cggcacctctcgatctacctgcacgaagacgtcgtcctgctcgtgaagctctgccgcatc
gtgaaggaatgcatcaagtcacacgactgcagacccccggagttcgtgaaggagatcctc
ctcaacttcatgggagtcctcgcgctgctccctgccaatgcggccgtcgcgagcgacatg
tgggagtgtatcaagctgttcccttacctcgacaggtactggatctactcagagatgcac
tggcagctctacttccagcacccgcagcttctcgtcgccagggcgaacgcgaaggaggag
atgcgcaagctcttgaagggcctcaccaaggagaacgtctcgaagcagcgcaggcacttg
gcaaggatctgccacagcaacccgctcgtcgtgatggaggttgttcttgatcagatccag
gagtacgagagcatgattgacgtctgcaaagacgcgttgggctactgcgggagcctcgcc
ctggacattctcagctatcttatcgtggaagagcttggaggagcactttatatctccaaa
cccttcctgcaggacgattgtgccaacctggctcgctggctcctgaacttctcgtcgttc
ctctccgatgtctacctcaagtaccccaggatggagatgaagggactcttgcagcacatc
ttcaaccggctgcagaaggatagcttgggcgagcttcagatcctgagagatctggtagcg
aagatggctgggatcaaattcgacgtggctacgatttcgtctgaagacatagacagcagg
agcggcggggagaggctccggctcgcttcggaatacccttggccgaccgaggtcctcttc
gaccgtgcggaggcggcaggagacatggggataggcaagctgggaggcgccgcaaagatc
aaggcataccaagcggcgcagaaggagaggagcgaagcttgcaagtggctcattaactcc
ctccaggagagcaagctgacggtgccgctgctggtgctgatcgcccagcagacctccggc
tgcctattcaccgccgaggcgatcaaacaggacaagatcaggttctcgtcctggctgcac
gtgcagtgtcaggagaccctcctggtgtacgctgacttcctgtggcgccgcgtccccacc
aaggacattgtcgggctgctccctggccctatggacctgatcaaccagctgcagatggag
cctgctcttgctcttttcctcctcagaccagcgctgaagggctcggacaccgcatccgtc
ctcgacctctccctccacgccaaggagatcctcagcagcatgcccagcaacctgaagcag
tcgtccccggcgctgttcaccaccttctggtcgctcacgctcaacgacatctccgtgccc
gtggagacttacgagaatcacgagcgacggttgaagaaggcgctggctgacctggaggag
acggaccggctggaccccaaggcgaaggacaaggacatcaagaagtggaaggagaacatc
accttggatctcgacaagctggagaaggagcggaagaagcaggtggacaacaacaagaag
gtcatgacaagaatcacagaggacaaggacgcgcttgtggagaaggacaagtcgtacaag
gcgatcccctgcttcttcctccaaacttgcgtgttcccgaggtgtgtccagtcgcccgag
gacgcggtcttctgcgctcgattcatccatctcctccacaagatcaagacgccgaacctc
tccaccattctcatctacaacatgatcatcaccacctttggcccaatggtgttctcccgc
acggagcaggaggcgaagcactttggcaagttcctgtcggagacacttcagatgctcaac
cgctgggcgtctacggaggaagtcttcaagaaggagtgcgagaacttcccaggcttcacc
aacgtcagccagaaacccaccaaacccgagaagatcgccttcagctcgttccagcagtgc
ttgcgcaactggcacaagcagctttccaaggccttcacgacgtgcctggagtcgtcggag
gggacggaggttcacaacgcgctgacgatcctttcggagctggtgggaagcacgttccca
gtgtacgacacgttccatgcagaggtgaagcagagggtgcagaagctgataggagaggag
cagcagtttgggcagtccatcgtagtgatggctcgttctgtgaacgctcggctgcaggcg
tgcgaatccaagatgctgaagctcccgtccaaggggaagaggaaggaagctcctgagaaa
gacaaggatgccgagaagaagcccaaggtggacaagggcggggcggcgcctccggccaaa
gatgtcaagcaggagcctgtgaggagggtggagaagcaggaggaggacaagaaggatgtc
aagcgggacagcgagcaggacaacaggaagaggaaccgagcggaggacgagggtgccaag
gtgcacgccgggaaggaggaagatccaagggccgtcagggcaaagaaggaggtgggccat
tcctccaagaaggaggggtccgtctctagccagtccaagtcgtcgatggacgggagggat
ggggagggcgggagggcgcgcgacgggaaggaggaggacaggccgtcgcacctggacgag
aggaaggagatgaagaaggaggagccccgcgtggacacgcacaagggcaggaaggaggtt
gacgttcgcgatctcggtaaggatcgagatgggagggacatggggcgtggggacggccca
ccgcggggggcgccctccaacatccgggacgacccgcaggggcagtcgaggatgggaggt
cgacttggttccccgagcagggagatcaagggcagggcagacctggatgacaagcgtgac
atcaagaggctgaggagggaggaggacaaggaccgccatctccctcctgcgcacccgatg
gacatgcggctcgacccgcgcgactctgggaggatgatggttaacgaacgacctggaccg
ggagggatgcggatggggggacctcccatggacagaatggagcctccgggaagccgcggg
gggaactttgtcgacatgagggacaggagggagaggccgcggcctggtggccctcctggg
ccgggagggtccaacatgtcaggaggcaacgggatgcgcggccggtag
DBGET
integrated database retrieval system
