Guillardia theta: GUITHDRAFT_134365
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Entry
GUITHDRAFT_134365 CDS
T02925
Name
(RefSeq) hypothetical protein
KO
K12830
splicing factor 3B subunit 3
Organism
gtt
Guillardia theta
Pathway
gtt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gtt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
GUITHDRAFT_134365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gtt03021
]
GUITHDRAFT_134365
03041 Spliceosome [BR:
gtt03041
]
GUITHDRAFT_134365
03036 Chromosome and associated proteins [BR:
gtt03036
]
GUITHDRAFT_134365
Transcription machinery [BR:
gtt03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
GUITHDRAFT_134365
Spliceosome [BR:
gtt03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
GUITHDRAFT_134365
Complex B
GUITHDRAFT_134365
Complex C
U2 SnRNP specific factors
GUITHDRAFT_134365
Chromosome and associated proteins [BR:
gtt03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
GUITHDRAFT_134365
TFTC complex
GUITHDRAFT_134365
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_RSE1_1st
Motif
Other DBs
NCBI-GeneID:
17308065
NCBI-ProteinID:
XP_005838411
JGI:
Guith1_134365
UniProt:
L1JS98
LinkDB
All DBs
Position
Unknown
AA seq
1295 aa
AA seq
DB search
MEIEVDGAPNQQIASPDEASDNVMYFRTIMKSPVRKASTVVRSKEAGQKAVHLVVSSKES
CLEVIKDSAHELIHLFDENVFGTIWDLKVHNYDFIAREDIELMVVRQAISVEHVTSARLP
DAFQGLGMDSGQDLVLKVNEVFLPRAAKSKSLWVDMSDFEEHRAYGHRISVAPTGSAVVI
SALEDRMCILPLSKRLENKGQIFDAEMDAVVQQLVAKVIPVPGGKLGAIADLQFTHNDES
GDNILHFAALVLRKGKGGFSSVLLFKANLESRTCFLMRSFNTQFCLTTVSLLRVVSQFVS
SVSASDQILLGGEGGILLLDTSSASNYPNIGSEGMLATDMEISLSERRIPPLNELGGPNT
LVTCIHVADCKEHHGNIKQREIILISTEEGKIWVAEIFQKASFEVKLLGSIDSPIVPSNI
VSILGQGGYRRFLVNGDNGDSAVMMMRLNGNEIEIETLERLTMLGVTTDFTVLSDKNVNG
GDEFDVLVCSGTGKHASIRRLRYGLPVETHVRSEKGLCDGIVGLYTITFEQKHDQSFLFM
AFTTGCRVLTVGSELSDVTDDLGLNPTALTLHAAANSDGHLIQVSDEEVIVIQQPVLDSM
DLDVIPCSQPERAVWRPAESTKISVSASLGNLVMCCTCGGTSIHILDTTRDQGSAGEFQI
RGEITSFRSSEEVSCMAMTSLGAHGSETRKISIIGTYADALKARAGKIKIYSLGEEKREV
ELAQSIDLGIYSGSDLSGSVPQSFGILPEPAGGVFLVVGLRNGKVIIFTLNALSLPLVGL
GTTRRLAESPITFVSITSYAGPSLIALVEDVAFLVTPSRASLQFQRIGFQPGGISHAAPF
ICDACPLGMAIVVDGQLKLVSIDRCEKLDVKTIPLALESEHTESESKLEDNFMPARVVWH
PDAKLVIVGCNYSRKVCGAEEEPENKVMCCELRLIDHVSWSTVHVQHIGENERIHALALY
RTLEDEVLVCVGTGPEISLVSKAQREVESTSLFEKRSASLNENESERSSDSDNEDQGVGD
ESPTGNETNLKRRRRESKVNSRLLIWRIVQKSGAPELVLVASISTRNACRAICQYQSCLA
VATGETWTLYEFSRVRLEKKERSCNKTRFRRLLSKTARFLITSLTSNGFHLAVGDCVDSF
STWRIAFPVFSWQMRATRGYFARLEVRVCTESPQALKLEDCAIDLLVGNGFLPTIDNFTF
KFTPTSGGCEFWKETSEGVHFAMVDYHAWGSDEGPPEGTKLKPVYIAIHAKASQSEVKGA
FRECFQSERGGDRVEVCRSRFRSLAGESQQWCEGF
NT seq
3888 nt
NT seq
+upstream
nt +downstream
nt
atggagatcgaggtggatggtgcaccaaaccaacagattgcgtctcctgacgaagcatcc
gacaacgtcatgtactttcggaccatcatgaaatcccctgtccgaaaagcttcgactgta
gtgaggagcaaggaagcagggcagaaagcggtccacttggtggtttcatccaaagagagc
tgcctggaagttataaaagactcagctcacgagttgattcatctcttcgacgagaacgtg
ttcggaactatctgggatctcaaggttcacaactatgactttatagctcgggaggatatc
gaactgatggtggtgagacaggcgatatctgttgagcatgtcacttcagcgcgtcttccg
gacgcatttcaagggctaggcatggactccggtcaagacctggtcctgaaggtgaacgag
gtcttcttaccccgagcggccaagtcgaagagcctgtgggtcgacatgagcgacttcgag
gagcacagggcatacggacatcggatctctgtggccccaacaggctcagctgtggtaatc
tcagcgctggaggacaggatgtgcatactgcctctgtctaagcggttggaaaacaaggga
cagatcttcgacgcagaaatggacgcggttgtacagcaacttgtagcaaaagtcattcca
gtccctggtggcaagttgggagcgatcgctgatcttcagttcacgcacaacgatgagtca
ggagataacattcttcattttgcagctcttgtcttgcgtaaggggaaaggaggtttttcc
tcggtgttattgttcaaagcaaacctggaatctagaacctgcttcctcatgcgatctttt
aacactcagttttgcctgacgacggtgtccttgcttcgtgttgtatcgcagtttgtttcg
agcgtgtccgcttcagatcaaattctgctgggaggggaaggagggattcttctgcttgac
acttcaagtgcgtcaaactatccaaacatagggagtgaggggatgttggcgactgacatg
gaaatttcactttctgaaagacggattccaccattgaatgagttaggcgggccaaacaca
cttgtcacgtgcatacatgtcgctgattgtaaggaacatcacggaaatatcaagcaaagg
gaaattatcttgataagtacagaggaagggaagatttgggttgctgaaatatttcaaaaa
gcatcgttcgaagtcaaattgctcgggagtatcgattcacccatagttcctagcaacatt
gttagtatcctggggcagggaggctacagaaggtttctagtaaacggcgacaatggagac
agtgcagtaatgatgatgaggctgaatgggaatgagatcgagatcgagactctcgaaaga
cttaccatgctcggagtcacgacagatttcaccgttctgtcggacaaaaatgtcaacggg
ggagacgaattcgatgtcttagtctgctctggtacgggaaagcatgcaagcattcggcgg
ctcaggtacggtttgcctgtagaaactcacgtccggtcagagaaaggcttgtgcgatggc
atcgttgggttgtacaccatcacatttgagcagaagcacgatcaatcgttcctcttcatg
gccttcactactggctgcagagttctcacagttggttctgagctgagcgatgtaacggat
gacctcggactcaaccccactgcactcactttgcatgctgcagcgaactcagacggacat
ctcattcaagtgtcggacgaggaggtcatagtcatccagcaacccgtcttggacagcatg
gatctcgacgtcattccttgctcgcagccagagagagcagtctggagacccgcagagagc
acaaagatcagcgtctctgcctctctggggaacctcgtcatgtgctgcacctgtggaggg
accagcatccacattctcgacaccacaagagatcaaggcagtgctggagagtttcagatc
agaggagagatcacgagcttcaggagcagcgaagaagtttcttgcatggccatgacaagc
ttaggagcccacggtagcgaaacacgaaagatctcaatcatcggaacttatgctgatgct
ctcaaggcgagggcaggcaagattaagatctattccctcggggaagagaagagggaagtt
gagttggctcaaagcatcgaccttgggatctactcaggcagtgatctctctggtagcgtt
cctcaatctttcggcatcctccccgaacctgctggtggcgttttcctggttgtcggcttg
aggaacggaaaagtgatcatcttcactttgaatgctctgtctctccctcttgtcgggctt
ggcacaacccgaagacttgctgagtctccgatcacctttgtcagtatcacttcctacgct
ggtccatcgctgatcgcccttgtggaagatgtagccttcctggtgacgccttctcgtgcc
tccttgcagtttcagaggatcgggtttcagcccggcggtatctcccacgcggctcccttt
atctgcgatgcctgtccacttgggatggcgatagtggtggacgggcaactgaagttggtc
tctattgatcgttgtgagaagttagacgtgaaaactatcccgcttgctttggaatcggaa
catactgagtcggagtcgaagcttgaggacaatttcatgcctgcacgtgttgtgtggcac
cctgacgccaagcttgtgattgttggttgtaactacagccgcaaagtctgcggagcagaa
gaggaacctgagaacaaggtgatgtgttgtgagctgcgactgatcgaccatgtttcctgg
tctacagtgcatgttcagcacattggcgagaacgagcggatccatgctcttgctctttac
cgtacacttgaagatgaagttctcgtttgtgtcgggactggacctgagatttctcttgtg
tccaaagctcagcgcgaggttgaaagtacatccttgtttgaaaagagatcagcaagcttg
aatgaaaacgagtcggagaggagttctgattcagacaatgaagaccaaggtgtaggtgat
gaaagtccgacgggcaacgagaccaacttgaagaggagaagaagggagagcaaggtcaac
tctaggttgctcatatggcgtattgttcagaaatcgggagctcccgaacttgttttggtt
gcctccatctcaaccaggaacgcttgtcgcgccatctgtcagtatcagagctgcctggcg
gttgcgacaggagagacttggaccctttatgagttcagccgtgtgagattggaaaagaag
gagaggagttgcaacaagactcggttcaggcggttgcttagcaagactgcacgtttcttg
atcacgagtttgacgtccaacggatttcacctggctgtcggcgactgtgttgacagtttc
agcacttggaggattgcgtttccagtcttctcgtggcagatgagagcgacgagggggtat
tttgctcggctagaagtccgagtctgtacagaatctcctcaagctttgaagctcgaggac
tgcgccatcgatcttcttgtcgggaatggtttcctacccaccattgacaacttcactttc
aaattcactcccacgtctgggggttgtgagttctggaaagagacttccgagggcgttcac
tttgccatggttgactatcatgcttggggcagcgacgaaggtccaccggaaggcaccaag
ctgaagccagtctacattgctattcacgcgaaagcatctcaaagtgaagtgaagggagcc
ttccgtgaatgctttcagagcgagcgaggaggagatcgagttgaagtttgcagaagcaga
ttcagatcgttggccggtgaatcacagcagtggtgtgaaggattttga
DBGET
integrated database retrieval system