Guillardia theta: GUITHDRAFT_134673
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Entry
GUITHDRAFT_134673 CDS
T02925
Name
(RefSeq) hypothetical protein
KO
K14327
regulator of nonsense transcripts 2
Organism
gtt
Guillardia theta
Pathway
gtt03013
Nucleocytoplasmic transport
gtt03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gtt00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
GUITHDRAFT_134673
03015 mRNA surveillance pathway
GUITHDRAFT_134673
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gtt03019
]
GUITHDRAFT_134673
Messenger RNA biogenesis [BR:
gtt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
GUITHDRAFT_134673
mRNA cycle factors
P-body specific factors
GUITHDRAFT_134673
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
17307794
NCBI-ProteinID:
XP_005838142
JGI:
Guith1_134673
UniProt:
L1JRS8
LinkDB
All DBs
Position
Unknown
AA seq
1205 aa
AA seq
DB search
MSFSDTSSALCPVPGVVELQELLRMVKQAQRAKNDTRSANLNAANARLDVNLKLLDASIK
KNEAIIKKLKMVSLENKDSIVSGIKQINMSKFISECVDAVSDSKIKSNDVPAMVQVVSVL
HQRYADFTKQLIPKLSSIFQPVRKDSATVDSESDRKDRLTKRRTMLRLLTELLVAGVYTD
GSILISALKELIAQELQAQQLDAGATLFSIVSGFVKYAADDLLNLRPQWQMEADGMLEEY
QKRKAENDASQPTRETTDNDMQESPEEPGEPAEEAMGSLEKDAECVEPEGITPENAEAPV
EAVATSMQSMQITDAEENENLEEVNSVEPTESPVISDEHREELFSILKEYYESTVSVLFE
MHSSLKQQEKENRRQLTLRGDLPEDCMKATEKKRADLEKALSNTKTLSEALQVEMPELPK
DPEDTTRLGGGAFVVGTQREREEENFEDNVFEDMDTRDFYEDLPNIFDLVPSLNSDVEAT
KLKSSSENATEGGEEASKPAADSSSGEPSKESSETSTQPDTANQEEDKEEDVNAAEKAKW
EEFLAHLATCQSRDLIDQAAQTFCSQNNKLNRRKLARALYNVPRTALSLIPYYARFVAVL
APAFPDIGQMLSQMLEQEFNEFMKYKSESNIESKVRNVRFQGELLKFKVAKPLAIFSCLQ
AFIDDFAYQNIELACNLLEVCGRFLYRTKTTHERTKNMLNTMMRLKNAKNLDSRLDTMVE
NAYYLCRPPERSARAQRKQRPAVQEYIRHLLFSKLSKSTLEFVKKQLRKLDWKENESYLI
KCLLKVQKMKYNQIYLLASLISGLTSYHSTLAVYVADDLLSEMRYLLQANEFSKQQRLLG
LVKLLGELYNDLVVDSSIIFDALYTFISSGSERTGYLPDSPSDFFRVRLVCSLLDTSGHY
FDRGIPKKRLDLFLAHFQRYLLGKTSLTMDVEFTVSDTFESLRPDLKRLDNVEAADANIA
RLENDMKMSRLRGLLALEVKPTTKDEPVESGENEGGESEDEEEHDRAGEDSDDNDGEQRV
EDDAEEDDAFDYKDEQVQADVLLSPSNICMQADDEEVVVHWRPQATQRSLEDEAFDAEFQ
KMLQENRAASGGARRRQLDLGIPFDLTSSDSSSEHPKIVKQDGESQVLFKLLTKKGNKPS
TKELAVPLDTTIASTSLERGNAMAEDRDELKRKVLGYQAQADGTQQRPFRGGGRRGYVIS
NSFGR
NT seq
3618 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttctcagatacttcctcggcgctatgtccggtgcccggggtcgtggagctgcaa
gagctcctccggatggtgaagcaagcacagagggcaaagaatgacactcgatccgccaac
ttgaatgcggcaaatgctcgtttggacgtcaatctcaaattattggatgcatcgatcaag
aagaatgaggcaatcatcaagaagttgaagatggtgtcgctggagaacaaggacagcatt
gtctctgggatcaagcagatcaacatgagcaaattcatcagcgagtgtgttgacgcagtt
tcggactccaagatcaagagtaacgatgtcccagcaatggtccaagtcgtatcggtgctt
caccagcgttatgcagatttcaccaaacaattgattcccaagttgagctcaatctttcag
ccggtaagaaaggactcggccactgtggactcggaatcagataggaaagatcgcctcacc
aaacgcaggactatgttgaggctcttgactgagcttcttgttgctggagtttacacagat
ggttccattctcatctcggcgctgaaggagcttatcgcgcaagagttgcaagctcagcaa
ctagatgccggggcaacattgttcagcattgtctctggattcgtgaaatacgcagctgat
gacttgctcaatctacgccctcaatggcagatggaggctgatggtatgctcgaggaatat
cagaaacgaaaagctgaaaatgacgcttctcaaccaacgagagagacaactgacaacgac
atgcaagaatcgcctgaagaacctggtgagcccgcagaagaggccatgggctcgctagag
aaggatgctgagtgtgtcgaacctgaaggaatcacacccgaaaatgctgaagctcctgtt
gaagccgttgctacttcaatgcagtcaatgcagatcactgatgctgaagagaacgaaaat
ctggaagaggttaactctgtagaaccgactgaaagccctgtgatttctgatgaacatcga
gaagagcttttcagcatcctcaaggagtactacgagagcacagtcagcgtgttgtttgaa
atgcattcctcattgaaacagcaagaaaaggaaaatcgcaggcagctgactctccgaggt
gatttacctgaagattgcatgaaagcgacagagaaaaaacgagctgatcttgaaaaggcg
ctgagcaacacaaagactctctccgaagcacttcaggtggagatgcctgagttgcccaaa
gacccggaggacacaactcgattgggaggaggagcttttgtcgttgggacccagcgcgaa
cgggaagaagagaatttcgaagacaatgtcttcgaggacatggatacgcgagatttctat
gaagatctgccgaacatttttgacttggtaccaagtttgaacagtgatgtcgaggccacc
aagttaaagagttcaagtgaaaatgcaactgaaggtggcgaggaagccagcaagccagca
gcagacagctccagtggagagcccagtaaggaatccagcgagactagtacacaacccgac
acggccaatcaagaggaggacaaggaggaggacgtaaatgctgctgagaaagccaagtgg
gaagaatttctcgctcacttggcaacttgtcaaagtagagatctcatcgatcaagctgct
cagacattctgttcgcaaaacaacaaattgaatagaagaaaactggctcgggcactctac
aacgtcccaaggacagcgttatcgctgattccttactacgcccggtttgttgctgtgttg
gcaccagcttttccagatattggacaaatgctttctcagatgctcgagcaagaattcaat
gagttcatgaagtataaatcagaatccaatatcgaatcaaaggttcgcaatgtgcgtttt
caaggagaactattgaagttcaaggtggcaaagccgcttgcgatctttagctgcctgcaa
gcttttatcgacgacttcgcatatcagaacattgaattggcttgtaaccttctggaggtc
tgtggacgattcttatacagaaccaaaacaacacacgaacgaacgaagaacatgctcaat
actatgatgcgcttaaagaacgcaaagaacttggacagccgactggacacgatggttgag
aacgcatattacttgtgtcgaccgcctgaaagatctgctcgtgcccaaagaaagcaacgc
cctgctgttcaggaatacatcagacatcttctcttctcgaaactctctaagagcacgctg
gaatttgtcaagaagcaactgagaaagctcgattggaaggagaacgagtcatacctcatc
aaatgcctgctcaaggtgcaaaaaatgaaatacaaccagatctacctgctggcctcgttg
atctcgggcctgacttcttaccattccacattggcggtctacgtcgccgatgaccttctg
tcagaaatgagatacctgctgcaagctaatgaattcagcaagcagcagcgactgctagga
cttgtcaaactcctcggagaattgtacaatgacctcgttgtggactcttcgatcatcttt
gatgcgctctacaccttcatctcgtcagggtcagaaagaacaggctacttgcccgactcg
ccctccgacttcttccgagtgaggctggtatgctccttgttggatacttcaggccattat
ttcgatcgaggaatccccaagaagcggcttgacctctttcttgctcacttccaacgatac
ttgctggggaaaacttcgctgactatggacgtggagttcacggtatccgacaccttcgag
tcccttcgaccagacctgaagcgtctcgacaacgtggaagcagccgacgcgaacatcgcg
cgactggagaacgacatgaaaatgagccgcctgagaggtctgctggcactggaagttaag
cccacgaccaaagatgaacccgttgaatccggagaaaacgagggaggagaatctgaggat
gaggaggagcacgacagagcaggagaggacagtgatgacaatgatggggagcagcgagtg
gaggacgatgctgaggaggacgatgcatttgactacaaggacgaacaggttcaggcagat
gttctcttgtcaccatctaacatctgcatgcaggctgatgatgaagaagttgtcgttcac
tggcggcctcaggccacacaacgctcgctcgaggacgaggccttcgatgctgagttccag
aagatgttgcaggagaaccgagcggcgagcgggggagctcgcaggagacaacttgacctg
ggcattcctttcgacctcacatcgtcggatagcagcagcgagcatcctaagattgtcaag
caagacggagagtctcaggttctcttcaaacttctgaccaagaagggcaacaagccgtcc
accaaggagctcgcagttcccttggacaccacaatcgcatcaacgtcgctggagagagga
aacgccatggctgaggacagagatgagctgaagcgtaaagttctgggataccaggcgcag
gcagatggtacacagcaacgtccattccggggtggaggtcgtcgtggctatgtgatcagc
aactcgtttggcagatga
DBGET
integrated database retrieval system
