Guillardia theta: GUITHDRAFT_135836
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Entry
GUITHDRAFT_135836 CDS
T02925
Symbol
TPR
Name
(RefSeq) Tpr, nuclear pore complex component
KO
K09291
nucleoprotein TPR
Organism
gtt
Guillardia theta
Pathway
gtt03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gtt00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
GUITHDRAFT_135836 (TPR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gtt03019
]
GUITHDRAFT_135836 (TPR)
Messenger RNA biogenesis [BR:
gtt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
GUITHDRAFT_135836 (TPR)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3974
Motif
Other DBs
NCBI-GeneID:
17306293
NCBI-ProteinID:
XP_005836775
JGI:
Guith1_135836
UniProt:
L1JNQ2
LinkDB
All DBs
Position
Unknown
AA seq
1688 aa
AA seq
DB search
MSYSASESRVREELSALQAAGDELSQKAAAALQTLLDDLAQAHADAASATLNNEQRFHQL
EQETITARCEAEASVKLKDEALKQKQQLQDQVAGLNNEISSMQKKINDTNAELQRVNAQL
QEVKRDKDELVWTHERRSQEAEKAKEEANQLRKRSSEQAQERQQLLLQIEEIRDTLTKLK
HAESELSFVSNNLSEKTHELSKLSTESHSRISRLERELAAEKTEVSRLNTVAEEWKKSCK
EQEEAYRNQIEKAQTVTQEFNATKALLESDLDNKNKLLNLAKSAQEDSDKEIAKLQSMNT
AHLNRVRVHQLYSRSASLSVSESWIAQVAEETLAKEKSEAATKIAELENRLKEAEKTRTE
YQGEGNNELLEKILTSSPAAVASEFVRDGRIAEIYKVLEDTCELLHRERHERVQAEACLS
EVVKELQDKGPAILRQRQEWESAVQANQVTNHKLEVALGELQEMKAAMEFLRLQRERSMS
DAASLERQNKDLTMQCRALLREVEELRNQLASPAVQRALVRSSSQGQNQGTPNIDENNMP
EVGTGVDAQNFITQHLVIYKNVNQLQEQNQKLLKVVRQLSADNERETEKMMQQLREEYGN
KIDVALKEVQEIRQERQELETRVANLVQQRDMYRILLAEADRSAIGEAMGEQSSAAVGIS
TISEVMSPGSSGVRTTKDAIKMLEQENNELKERNEAALSLLRSELATAQDAKLKAEQRAA
QSESDASFLRDRHKSLQSTMDSMNTEITGLRAKISELSMNVSSYERKVSDQQTELLNVRW
EKQKESDSKITAETSLKHSEAKINQLNQEIEAIKNEKNQMQRLLNQISMSRDEDQRRWSE
DLKRMSEDLERKEKDLTDLRSEVAKERSKLDEMRVAYEYKIGELRASMRKSDEEMAHLRE
DNIKLESAAKNSQEKADFFQKQLESAESRFREALYQQQQSRSLAIEDSSNQHRDNWKSIA
TQHEQELTTLRQHLDTSRERAEKERAELEALLSEKTTLLAQRQEAISKLTEQVRTATSER
DQLQQQVDTREGGLKAQINQLELERDGLRERYKLSVEENERLDEMRKQALADYEREVSQH
ASKLEELRQIRSRLGSVMIKLVGSRRCDMNVQRGRGSTQRIPDSSRSASFPSHIELPVKL
RIQDLEQKLAKIDKEKEERLLSLSASISNADESMELQDDNDKQMREMREHLRRLKHKLDL
AEARLLDSEQEAARAKQRADHANRELAAAQSRLQIELERNSSILNTESQFQHLQEQVRSL
SIFKESNAQLRTEAKEAQDKCNALENKLKELESSIMPLKQLDQQCARWRERVTELSNKFG
GGGIDISEHEKVRSELEKEAEKTAQTQIEQLQTESSKATPITVEAIRAHEEFKKMEEARR
EAVHRCKQFLDKNQRQKDELKKQADELQKMRDEKSSLKEQIVQELGQQQSSNVEPLKAQL
AESKQEIESLKAECETLKSNLTKLESERDQLQLTVQQKETEINNLKSKANPAPDTELQKQ
LDEAKKEVQPFHDCRGFVGLTLVKVEKVKAERESLQAEMKQIVSGLESSKAKVDDPASLS
SLGGSVSTQQDNKMHSDRANTLLRQIKELKSNDATLKSKIASLEKELDAFKSAAAQQPKE
VVQQESASTAGKRTAGHDQDASSTSTKRHKPSEQSEIASEPAQASVQPTATSQKDDNVIS
ASTPLTFP
NT seq
5067 nt
NT seq
+upstream
nt +downstream
nt
atgtcttactctgccagcgagtctcgagtacgagaggagctttctgcgctgcaggctgct
ggtgatgagctcagtcagaaagcggctgctgccctgcagactcttctggacgatctggca
caggcgcatgcagatgcagcatcagcaactctcaacaacgagcagcgattccatcagctt
gagcaagagactatcactgcccgctgtgaggctgaagcgagtgtaaaactcaaggatgaa
gccctcaagcagaagcagcaattgcaggatcaggttgccggcttgaacaacgaaatatct
tccatgcagaaaaagatcaatgacacgaatgccgagttgcagcgtgtcaatgcacagctg
caagaagtgaagagagacaaggacgagcttgtgtggacacatgaacgcaggagccaggaa
gctgaaaaggcgaaagaggaagcaaaccagctgcgaaagaggagctcagagcaagcgcag
gagaggcagcagctgctgcttcagatcgaggaaatccgcgacactctgacgaagctcaag
cacgcggagtccgagctttccttcgtcagcaacaacttgagtgagaaaacgcacgagctc
tctaagctatccacggaatctcactcgaggatctcacgcctcgagcgagaacttgctgct
gaaaagaccgaagtctctcgtctgaatactgtcgcggaggagtggaaaaagtcctgcaaa
gagcaggaagaagcatacagaaaccagatcgagaaggctcaaaccgtcacgcaagagttc
aatgcaaccaaggctctccttgaatcagatcttgacaataagaacaagttgttgaatttg
gccaaaagtgcacaagaagacagcgacaaagaaatcgcaaagctacaatctatgaatacc
gctcatcttaatcgagtccgggtacaccagctttattcacgcagtgcaagtcttagtgtg
tctgaatcatggattgctcaggttgcggaagaaactcttgccaaagagaaaagtgaggct
gccacgaagattgcagagctcgagaacagattaaaggaagcagagaagacccgaactgag
tatcagggagagggcaacaatgaacttctcgagaagatcttgacaagctctccagctgca
gttgcttctgaatttgttcgtgatggccgcattgctgaaatctacaaggtcctggaggat
acatgcgaattgctacacagagagcgacatgagcgagtgcaagctgaagcttgtctctct
gaagtggtcaaggagctgcaagataagggccctgctattctcaggcaaaggcaggaatgg
gaaagcgcagtgcaggccaatcaagttaccaatcacaagctagaggtagctcttggtgaa
ctacaagaaatgaaagcagccatggaatttctgcgccttcagcgcgagcgaagcatgtct
gatgctgcttcattggaacggcaaaacaaagatctcactatgcaatgtcgtgctctattg
cgagaagtggaagagctgagaaatcagcttgcgtcacctgctgttcagcgtgcgttggtc
aggagtagttcgcagggacagaaccaaggcacacccaacattgatgagaacaacatgccc
gaagttggaactggagtagatgctcagaatttcatcacacaacatcttgtgatttataag
aatgtaaatcaacttcaggaacagaaccagaagcttctgaaggtcgttcgccaactaagt
gctgacaacgagagagaaacagagaagatgatgcaacagctgcgcgaggaatatggtaat
aagatagacgtggctctaaaggaggtccaggagatccgacaggaacgccaggagctcgaa
acacgtgttgccaaccttgtgcaacaaagagacatgtacagaattcttcttgcagaggcg
gacaggtctgctattggagaagccatgggagagcagagctcagcagcagttggaatctca
actatttcagaggtgatgtctcccggctcaagtggagtgaggaccacaaaggacgcaatc
aagatgttagagcaagagaacaacgagctcaaggagagaaatgaggctgccttgtccctc
cttcgctctgagttagcgactgcacaagatgcaaagttgaaggctgaacagcgtgctgca
cagtctgagagcgatgcctcgttcctccgggacagacacaaatcactccagtctaccatg
gactcgatgaatactgagattacggggctcagagccaagatctctgagctctccatgaat
gtctcgtcatatgaacgcaaagtttcggatcagcagactgaactcttgaatgtccgttgg
gagaagcagaaggagagtgattctaagattacagcagagacgtctctgaagcactcagag
gccaagatcaatcagctcaaccaggaaattgaagcaatcaagaatgaaaagaatcaaatg
caaagactcctaaaccagatttcgatgtcaagagatgaagatcagcgacgatggtcggag
gacctgaaacgaatgagtgaagacttggaaagaaaggagaaggatctcacagaccttcgc
agcgaggttgccaaagaaagatcgaagcttgatgaaatgagggtagcttatgagtacaag
attggagaattgcgagcgtccatgagaaagtcagatgaagaaatggctcatttgcgtgaa
gataacatcaagctggaaagtgctgcgaagaactctcaagaaaaggcggactttttccag
aagcagctcgagtctgcagagtcaagattcagagaagctctttatcaacagcagcagtca
agatcactcgcaatcgaggattcttcgaatcagcatcgcgacaactggaagtcgattgca
acgcagcatgagcaggagcttacgactctccgccagcatctcgacactagcagggagagg
gcagagaaagaaagggcagagcttgaggccctcctctccgagaagaccaccctcttagca
caaagacaggaggccatttccaaattgaccgagcaggttcggactgcgacttctgaacga
gatcagcttcagcagcaagtcgacacccgagaaggaggcttgaaggcccagatcaaccag
ctggagctggagcgagatggtcttcgtgaacgatacaagctgagcgtggaagaaaacgag
cgacttgatgaaatgagaaagcaggcccttgcagattacgagcgagaagtgtcgcaacat
gcctccaagctggaggaactgcggcagatccgctctcggcttgggtcagtcatgatcaag
ctcgttggtagcagacgatgtgacatgaatgttcagagaggtcgaggttcaactcaaaga
atcccagacagctctcgaagtgcgtcattcccatctcatatcgagttgcctgtaaagttg
cgcattcaagatttggagcagaagctcgcaaagattgacaaggagaaggaagaacgtctg
ctgtctttgtcggcctccatctcgaatgcggatgagagcatggagcttcaagatgacaat
gacaagcagatgcgagagatgcgagagcatctcagacggttgaaacacaagctcgacctg
gcagaagctaggttgcttgactccgaacaagaagctgctcgggccaagcagcgtgcagac
catgcgaatcgagagttggcggcggcgcaatctagactgcagatcgaattggagcgcaac
agctcaattctcaacaccgagagtcagttccaacaccttcaggaacaagttcgcagcttg
agcatcttcaaggagagcaacgctcaacttcgaactgaagcaaaggaagcccaggacaaa
tgcaacgcccttgagaacaagttgaaggaacttgaatcttcgatcatgccgctcaagcag
cttgatcagcaatgcgcgagatggcgagagagagtgacggagctgtccaacaagtttggt
ggtggtggaatagatatcagcgagcatgagaaagtgcgaagtgagctcgagaaggaggcg
gaaaaaactgcgcagacacaaatagagcagctccaaacagaaagctccaaggcaactcct
atcaccgtggaggcgatccgtgcgcatgaagagtttaagaagatggaggaggcaagacgt
gaggctgttcaccgctgcaaacagttcttggacaagaaccaacgtcagaaagacgagttg
aagaagcaggccgacgagcttcagaaaatgcgcgatgaaaagagcagcctcaaggagcag
attgtccaggagctcggacagcagcagtcgtccaacgtcgagcctttgaaggctcagctt
gcagagtccaagcaggagatcgaatccctcaaggcagagtgcgagactctgaaatccaac
cttacaaaacttgagagcgagagggatcaactccagctcactgtccagcagaaggagact
gagatcaacaacttgaagagcaaggcaaatccagcaccagacactgagttgcagaagcag
cttgatgaggcgaagaaagaggtacagccattccatgactgtcgaggatttgtagggctg
actttggtcaaggtggagaaagtgaaggcagagagggagtccctgcaggcggagatgaag
cagatcgtctcgggccttgagagctccaaggctaaggtcgatgatcctgcttccttgtct
tcgctcggaggctcagtgtcgacccaacaggacaacaagatgcactctgaccgcgccaac
acgctcctgcgacagatcaaggagctcaagagcaacgatgccacactcaagtccaagatc
gcgagcttggagaaggagctcgatgccttcaagtcggcagcagctcagcagccgaaggag
gttgttcagcaggagagtgcaagtaccgcaggaaaaaggacggcagggcacgaccaggac
gcgagctccacttctaccaagcgacacaagcccagcgagcagagtgaaatcgcaagtgag
cccgcgcaagcatctgtacagccaactgcgacatcgcagaaagacgacaacgtaatctct
gcttccacgcccttgacctttccgtga
DBGET
integrated database retrieval system
