Guillardia theta: GUITHDRAFT_137719
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Entry
GUITHDRAFT_137719 CDS
T02925
Name
(RefSeq) hypothetical protein
KO
K18725
nucleoporin POM152
Organism
gtt
Guillardia theta
Pathway
gtt03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gtt00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
GUITHDRAFT_137719
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gtt03019
]
GUITHDRAFT_137719
Messenger RNA biogenesis [BR:
gtt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
GUITHDRAFT_137719
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig-like_POM152
Ig_Pom152
DUF7490
Motif
Other DBs
NCBI-GeneID:
17303695
NCBI-ProteinID:
XP_005834091
JGI:
Guith1_137719
UniProt:
L1JF32
LinkDB
All DBs
Position
Unknown
AA seq
1045 aa
AA seq
DB search
MSQPNRRLWLLLLALLAACPGVSSWPSWIEIHVEHTSASAKLRPGNVTICDGGTAKLAVS
VQGGTGPWKAGYVLLGRDTRMTPMQVTILRDSKYFDSLLINPAAFSWSSTTLATETVETS
LPGKYTLGRVCDAHFCNGTVSTAPFVVSVASPPTARILHSGPICLPLVKSFTEKLLELQG
VPPFQVELALVGTDKTVSVKYPSAGKHVLPNDLLLHRGLWGIVQLSDNSGCAAEMESVTW
VSTLAVQQVPTGSLSIRSDVCGNEDAQLDVKLDVGVPPWSFSLLYPNGTILKAANLTRRT
FSISVENVGSYSLVSLNDSVCSNASMQAQNKNVQVSAKGEILTGRILNRTIQTCPGVFHA
VSGEVQGKGPWSIVIHRNGEFWRRIEHHRDDSGSEKSGRSNFTFQVEVAGNYSLYSVTDA
RSCTVRGGGLVQVVLMPAPTLTMTTTCKQDVASMECAREADRLDVCVGEEVSVRANLTGD
GVITIASPSWNETKKVKVAAQNKSGWVVHQVDLSRSVEFSTGQYTITSITDRTCSRTLSY
PLLVHPRPVFSLRGGVTDVCSSTGQASLEVRESSGYGGRWTAHILQPSGKVMMLNSTKPT
AQMLVKEPGVYTLVDVEAGGCKPVVEQGVDGKPKTVAVSLFESPKASISGGGSKCSAGGA
ALDVKIHVQGGQRPYKVQLAFNGKPQQDSKVTSPDGVLVLPVSKEGTYTISHVRDARQCA
AAASDITGSAIIKSYPQAIAGFQKRTLGFCVGEAAEEVVVSVKGNKAPAPWNMTILKDEQ
FYTTISVPNSSRDGGHVTFRAEASGDYRIAEDTFTDSRGCLGRAQGSLKVVEYLLPSVAV
RSSIAPDTRGLCEGAAPSLELSGSPPWSVTLEVKRKGAKGRTCTITNIHDRSLQLSGSFL
SRHCGTSVSDGFLPEGNHVITSVSSEWRNDAGDVKTCSRKDLSIPIRILGSPSASLAPLV
CKHLCKGEAGGMMVNLTHGTPPFTVQIEDEGSNVLEQDFEFEVGEFRLDKSRIIKQQMKL
PQGSAHDISVGSHNWTIVSVRDANG
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagccgaaccgccgcctttggctcctcctgctcgccctcctcgccgcctgccct
ggggtcagcagctggccgtcatggatcgagattcacgtcgagcatacttctgcatccgcg
aagctgcgaccaggaaacgtcacaatctgtgacgggggcaccgccaaattggcagtgtca
gtgcagggcggcaccggcccatggaaggcaggatatgtcttgttgggacgagacaccaga
atgactccaatgcaggtcaccatcctgcgagacagcaagtacttcgatagcctgctcatc
aaccctgccgccttctcctggtcctctactacccttgccaccgagaccgtagagacgtct
cttcctgggaagtacaccctgggcagggtctgcgatgctcatttctgcaacggcacagtc
agtactgctcccttcgtggtcagcgtcgcgtctcctcccaccgcacggatcctccactcg
ggccccatctgcctgccccttgtcaagagcttcactgagaagctgcttgagctgcaggga
gttcctcctttccaggtcgagctcgcgctggtcgggacggacaagaccgtctccgtcaag
tacccgagcgccgggaagcatgtcctgcccaacgacctcctcttgcaccgggggctatgg
ggcatcgttcagctgtcggacaacagcggctgcgctgcagagatggagagcgtgacgtgg
gtgtcaacgctggccgtgcagcaggtcccgacgggatctctgtcgatccgcagcgatgtg
tgcggcaacgaggacgcgcagctcgatgtgaagctcgacgtcggagtcccgccatggtcg
ttcagcctgctctaccccaatgggaccatcctgaaggctgcgaacctgacgaggaggacg
ttcagcatcagcgtggaaaacgtggggagctattccctcgtctccctcaacgattccgta
tgcagcaacgcctccatgcaagcacagaacaagaacgtgcaggtgtcagccaagggtgaa
atcctcactggcaggattttgaaccgaacaatccagacttgtcctggcgtctttcatgcg
gtctcgggagaagtgcaagggaaggggccatggtcgattgttattcacaggaacggggaa
ttttggaggaggatcgagcatcatagagacgactcaggctctgagaagtctggacgcagc
aatttcactttccaagtggaagttgccgggaattacagcctgtactccgtgacagatgcg
aggtcgtgcacagtgaggggaggagggcttgtgcaggtcgttctgatgcctgctcccacc
ctgaccatgaccacaacctgcaagcaagacgtcgccagcatggagtgcgcgagagaggct
gacaggctggacgtttgcgtgggagaagaggtctctgtgcgagccaacctgaccggcgat
ggcgtcatcaccatagccagtcccagctggaacgagacgaagaaggtcaaagtggcagcc
cagaacaagtcaggatgggtcgtccaccaagtggacctttctcgcagcgtagaattcagc
accggccagtacaccatcaccagcatcaccgatcgcacctgctctcggacgctctcgtac
cctctccttgtccaccctcgccctgtcttctcgctccgcggcggcgtgactgacgtctgc
agctcgaccggtcaggcgtcgctggaagtccgggagtcgagcgggtacgggggaaggtgg
acggcgcacatcctgcagccgtcggggaaggtcatgatgctgaactctacgaagccaact
gcccagatgttggtgaaagagccgggcgtgtacacgctggtggatgtggaagcgggaggc
tgcaagcctgtcgtggagcaaggagtcgacgggaagcccaagactgttgccgtgagcctc
tttgagagccccaaggcctcgatctcgggaggaggcagcaagtgctcagctggaggagca
gcgcttgacgtgaagattcacgtgcaaggaggacagcggccgtacaaagtccagctggcc
ttcaacgggaaaccccagcaggactccaaggtgacgtcacctgacggtgtgctggtgctt
cctgtcagcaaggaagggacgtacaccatctcgcacgtgcgggacgcgcggcagtgtgcc
gctgctgcctcggacatcaccggcagtgccatcatcaagagctacccgcaagccatcgca
ggcttccagaagaggacgttgggcttctgcgtgggagaggcggcggaggaggtggttgtg
tctgtgaaggggaacaaggcgcctgccccttggaacatgacaatcctcaaggacgagcag
ttctacaccaccatctccgtccccaactcctcgcgcgatggaggtcacgtgacgttccgg
gcggaggcctcgggggactacaggatagccgaagacaccttcactgacagcagaggctgc
cttggaagggcgcagggcagcctcaaggtcgtcgagtacctcctgccttccgtcgctgtc
cgcagctccatcgcccccgatacccgcgggctgtgcgaaggagcggccccttcgctggag
ctgtccgggagcccaccctggtcagtcacgctggaggtcaagaggaagggggcgaagggc
cggacctgcaccatcaccaacatccacgaccggtcgctgcagctgagcgggagcttcctg
tcgaggcactgcgggacgagcgtcagcgacggcttcctgccagagggcaaccatgtcatc
acgagcgtctccagcgaatggcgcaacgatgcgggggatgtgaagacctgcagcaggaaa
gacctctcgatccccatccgcatcctcggctcgcccagtgcttccctcgcgccgctggtc
tgcaagcacctctgcaagggggaggcaggagggatgatggtcaacctcacccacgggacg
cctcccttcaccgtgcagatcgaggacgagggcagcaacgtgctggagcaggacttcgag
ttcgaggtaggagagtttcgcctcgacaagagcaggatcatcaagcagcagatgaagctg
cctcaggggtcggcgcatgacatctcagtggggtcgcacaactggacgatcgtgagcgtg
agggatgccaacgggtaa
DBGET
integrated database retrieval system