Guillardia theta: GUITHDRAFT_140204
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Entry
GUITHDRAFT_140204 CDS
T02925
Name
(RefSeq) hypothetical protein
KO
K10755
replication factor C subunit 2/4
Organism
gtt
Guillardia theta
Pathway
gtt03030
DNA replication
gtt03410
Base excision repair
gtt03420
Nucleotide excision repair
gtt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gtt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GUITHDRAFT_140204
03410 Base excision repair
GUITHDRAFT_140204
03420 Nucleotide excision repair
GUITHDRAFT_140204
03430 Mismatch repair
GUITHDRAFT_140204
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gtt03032
]
GUITHDRAFT_140204
03036 Chromosome and associated proteins [BR:
gtt03036
]
GUITHDRAFT_140204
03400 DNA repair and recombination proteins [BR:
gtt03400
]
GUITHDRAFT_140204
DNA replication proteins [BR:
gtt03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
GUITHDRAFT_140204
DNA Replication Termination Factors
ELG1-RFC complex
GUITHDRAFT_140204
Chromosome and associated proteins [BR:
gtt03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
GUITHDRAFT_140204
DNA repair and recombination proteins [BR:
gtt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
GUITHDRAFT_140204
Check point factors
HRAD17(Rad24)-RFC complex
GUITHDRAFT_140204
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_16
RCF1-5-like_lid
AAA_14
AAA_22
RuvB_N
Rad17
nSTAND3
Mg_chelatase
AAA_3
AAA_24
NTPase_1
MeaB
AAA_19
TniB
AAA_5
Viral_helicase1
RNA_helicase
Gp44_lid
ABC_tran
AAA_assoc_2
AAA_25
AAA_18
FtsK_SpoIIIE
DUF815
AAA_28
bpMoxR
AAA_7
NPHP3_N
DNAX_ATPase_lid
KTI12
MCM
SLFN-g3_helicase
AAA_30
ATPase_2
Motif
Other DBs
NCBI-GeneID:
17300524
NCBI-ProteinID:
XP_005830733
JGI:
Guith1_140204
UniProt:
L1J5D3
LinkDB
All DBs
Position
Unknown
AA seq
331 aa
AA seq
DB search
MPLPSANAAASLPWVEKYRPQTLKEVVGNEDAVARLQAIAKDGNMPHLLLTGSPGIGKTT
CVLALARELLGDSFKEGVLELNASDERGIDVVRNKIKMFAQQKVTLPPGRHKIIILDEAD
SMTSASQQAMRRTMELYSNTTRFALACNNSSEIIEPIQSRCAILRFAKLSDKELLSRLQD
ICEKEEVLASTDGLEALIFTADGDMRQAVNSLQSTANGFGIVNQESVFKVCDQPHPKTAI
QIVKSCLTGDIKNAHSKLEDLWQRGYSAQDIVQTIFKVTRNMDMPEKSKLDFLKEIGIYH
MRVLEGVDSLVQVSGLLGKLCLLKESSAVTA
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgccgctaccgtctgcgaacgcggctgcgtcgcttccatgggtggaaaagtataggcca
caaaccttgaaagaagttgttggcaacgaagatgccgtcgcacgcctccaggcgattgct
aaagacgggaatatgcctcacctgctgttaactggttcgcccggaataggaaagacgact
tgcgtgcttgcgctagctcgagagcttcttggggactccttcaaggaaggagtgctggaa
ctgaacgcctcggatgaaagaggaattgatgtcgtcaggaacaagatcaagatgtttgct
cagcagaaggtcacgctacctccggggagacacaagattatcatcttggacgaggcggac
agcatgacttcggcatcccagcaggccatgagacgcacaatggagttgtactctaacacg
accagattcgcgctggcgtgtaacaattcttctgaaatcatcgagcccattcagagtcga
tgtgccatcctgcgatttgccaagttgtcagacaaagaacttctcagcaggctccaagat
atctgtgagaaggaagaggtcttggcctccacggatggcctcgaagctctcatcttcact
gcggatggcgatatgcgacaagcagtcaattcgttgcagagtactgccaatgggtttgga
attgtaaatcaagagtcagtgttcaaggtttgtgatcaacctcatccgaaaacagcgatt
caaatcgtgaaatcatgcctgactggagacatcaagaacgcacactcgaaactagaagat
ctttggcagcggggatattcagcacaagacatcgtgcagacaatcttcaaggtcaccagg
aacatggacatgccagagaagagtaaacttgacttcctcaaggagatcggcatctatcat
atgagggttcttgaaggagtagattctcttgtccaggtctctggtctcctcggtaaactt
tgtctcttgaaagaatcaagcgcagtgacagcctaa
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