KEGG   Guillardia theta: GUITHDRAFT_140204
Entry
GUITHDRAFT_140204 CDS       T02925                                 
Name
(RefSeq) hypothetical protein
  KO
K10755  replication factor C subunit 2/4
Organism
gtt  Guillardia theta
Pathway
gtt03030  DNA replication
gtt03410  Base excision repair
gtt03420  Nucleotide excision repair
gtt03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:gtt00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    GUITHDRAFT_140204
   03410 Base excision repair
    GUITHDRAFT_140204
   03420 Nucleotide excision repair
    GUITHDRAFT_140204
   03430 Mismatch repair
    GUITHDRAFT_140204
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:gtt03032]
    GUITHDRAFT_140204
   03036 Chromosome and associated proteins [BR:gtt03036]
    GUITHDRAFT_140204
   03400 DNA repair and recombination proteins [BR:gtt03400]
    GUITHDRAFT_140204
DNA replication proteins [BR:gtt03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    GUITHDRAFT_140204
  DNA Replication Termination Factors
   ELG1-RFC complex
    GUITHDRAFT_140204
Chromosome and associated proteins [BR:gtt03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    GUITHDRAFT_140204
DNA repair and recombination proteins [BR:gtt03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     GUITHDRAFT_140204
  Check point factors
   HRAD17(Rad24)-RFC complex
    GUITHDRAFT_140204
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_16 RCF1-5-like_lid AAA_14 AAA_22 RuvB_N Rad17 nSTAND3 Mg_chelatase AAA_3 AAA_24 NTPase_1 MeaB AAA_19 TniB AAA_5 Viral_helicase1 RNA_helicase Gp44_lid ABC_tran AAA_assoc_2 AAA_25 AAA_18 FtsK_SpoIIIE DUF815 AAA_28 bpMoxR AAA_7 NPHP3_N DNAX_ATPase_lid KTI12 MCM SLFN-g3_helicase AAA_30 ATPase_2
Other DBs
NCBI-GeneID: 17300524
NCBI-ProteinID: XP_005830733
JGI: Guith1_140204
UniProt: L1J5D3
LinkDB
Position
Unknown
AA seq 331 aa
MPLPSANAAASLPWVEKYRPQTLKEVVGNEDAVARLQAIAKDGNMPHLLLTGSPGIGKTT
CVLALARELLGDSFKEGVLELNASDERGIDVVRNKIKMFAQQKVTLPPGRHKIIILDEAD
SMTSASQQAMRRTMELYSNTTRFALACNNSSEIIEPIQSRCAILRFAKLSDKELLSRLQD
ICEKEEVLASTDGLEALIFTADGDMRQAVNSLQSTANGFGIVNQESVFKVCDQPHPKTAI
QIVKSCLTGDIKNAHSKLEDLWQRGYSAQDIVQTIFKVTRNMDMPEKSKLDFLKEIGIYH
MRVLEGVDSLVQVSGLLGKLCLLKESSAVTA
NT seq 996 nt   +upstreamnt  +downstreamnt
atgccgctaccgtctgcgaacgcggctgcgtcgcttccatgggtggaaaagtataggcca
caaaccttgaaagaagttgttggcaacgaagatgccgtcgcacgcctccaggcgattgct
aaagacgggaatatgcctcacctgctgttaactggttcgcccggaataggaaagacgact
tgcgtgcttgcgctagctcgagagcttcttggggactccttcaaggaaggagtgctggaa
ctgaacgcctcggatgaaagaggaattgatgtcgtcaggaacaagatcaagatgtttgct
cagcagaaggtcacgctacctccggggagacacaagattatcatcttggacgaggcggac
agcatgacttcggcatcccagcaggccatgagacgcacaatggagttgtactctaacacg
accagattcgcgctggcgtgtaacaattcttctgaaatcatcgagcccattcagagtcga
tgtgccatcctgcgatttgccaagttgtcagacaaagaacttctcagcaggctccaagat
atctgtgagaaggaagaggtcttggcctccacggatggcctcgaagctctcatcttcact
gcggatggcgatatgcgacaagcagtcaattcgttgcagagtactgccaatgggtttgga
attgtaaatcaagagtcagtgttcaaggtttgtgatcaacctcatccgaaaacagcgatt
caaatcgtgaaatcatgcctgactggagacatcaagaacgcacactcgaaactagaagat
ctttggcagcggggatattcagcacaagacatcgtgcagacaatcttcaaggtcaccagg
aacatggacatgccagagaagagtaaacttgacttcctcaaggagatcggcatctatcat
atgagggttcttgaaggagtagattctcttgtccaggtctctggtctcctcggtaaactt
tgtctcttgaaagaatcaagcgcagtgacagcctaa

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