Guillardia theta: GUITHDRAFT_144829
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Entry
GUITHDRAFT_144829 CDS
T02925
Name
(RefSeq) hypothetical protein
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
gtt
Guillardia theta
Pathway
gtt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gtt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
GUITHDRAFT_144829
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gtt03041
]
GUITHDRAFT_144829
Enzymes [BR:
gtt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
GUITHDRAFT_144829
Spliceosome [BR:
gtt03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
GUITHDRAFT_144829
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
DEAD
AAA_22
AAA_19
nSTAND3
AAA_30
PWI
PhoH
ATPase
nSTAND_NTPase5
AAA_16
AAA_29
Cas3-like_C_2
ABC_tran
Motif
Other DBs
NCBI-GeneID:
17294444
NCBI-ProteinID:
XP_005824686
JGI:
Guith1_144829
UniProt:
L1IN45
LinkDB
All DBs
Position
Unknown
AA seq
763 aa
AA seq
DB search
MADLKKWVGDQLHGLIGMSESNLVDYVIALAKKSRDEAALMAALRDNDVPINDESRRFAL
QLMKSVPKAADNRAAEKAAKQKQEERERQRKQVEMLQKNNEYTLLNDDADDIQVDNRAND
NLRKLESKEMKREKKEKKRNLRKTKWNEDEDDDNGQKDEPSSKKPKIEDEDEALEEWEME
ELERIRDLAERDAFVNRLKVRDEKKTKKLVAEKDDFMVKDEETGEHRTLTEEERNFIFEE
SRIVSRQAYLEKRENKKIDELVESIEDEKRLFEGIKLTAKEKRDFIVKQRVLDLVKQRND
TIDKTPNYVMPESYDDTTKPESRSRRYKVLDNRYDEIEDNVLPTDQDVHEGLQIEHASIR
VGHKAEKHQRGSEYDFVLEDQVDFVKDAISSAEVNYLEEPDEESVKERRHRSMMEERMSL
PIYPYRQQLLDAIAEEQILIIVGETGSGKTTQIMQYLIEAGYCDGGSKIACTQPRRVAAM
SVAKRVADEMDCKLGHDVGYKIRFEDSTSEKTKLIYMTDGMMLREFLGEPDMASYSVIMV
DEAHERTLHTDVLFGLVKDVARFRHRDSELGELKLLISSATMDAQKFHEYFDGAPIFTIP
GRRYPVDVFYTKAPEANYLEAAVVTVLQIHVTQGKGDILVFMPGQQEIEATVELLNERTK
GFGTKLGELIILPVYSTLPSHEQAKIFEDTPPGARKVVIATNIAETSLTIDGIVFVIDPG
FVKQKSFNPRSGMESLVVTQISKAAAQQRSGRAGRTAPGKCFR
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atggcagatctcaagaagtgggttggcgatcagctccatgggctgattggtatgtccgag
agcaaccttgtcgactatgtgatcgccttggcgaagaaatccagagatgaagcagctctc
atggcggcacttcgtgacaacgatgtccccatcaatgacgagagcaggagatttgcgttg
cagctgatgaagagcgtgccgaaggcggcggacaatcgcgcagcagagaaagcggcgaaa
cagaagcaggaggagagggagaggcagaggaagcaggtcgagatgctgcagaagaacaat
gagtacacgttgctgaatgatgacgccgacgacatccaagttgataaccgagccaacgac
aacctacgaaagctggagagtaaggagatgaaacgcgagaagaaagagaagaagcgaaat
cttcgcaagacaaagtggaatgaggatgaagatgatgacaatggtcagaaggacgagcca
tcctcgaagaagcccaagattgaagacgaggatgaagccttggaggaatgggagatggaa
gagctggagaggatccgcgatcttgctgagagagatgctttcgtcaacaggctgaaagtt
cgagatgaaaagaagacaaagaagctcgtggctgagaaggacgatttcatggtcaaagac
gaggagacgggggagcatcgcacactgaccgaagaggagcgaaacttcatcttcgaagaa
agcaggatagtctctcgtcaggcgtatctggagaagcgagagaacaagaagatagacgag
cttgtggagagcattgaggatgagaagcgcctgttcgagggcatcaaactgacggcaaag
gagaagagagacttcattgtgaagcaaagagttttggaccttgtgaagcaaaggaatgat
accatcgataagactcccaactatgtgatgccagagtcttacgatgacacgacgaagccg
gagtcacgcagcaggagatacaaggtcttggacaaccgatacgacgagatcgaagacaac
gtcttgcctaccgaccaagacgtccacgagggactgcagatcgagcatgcctccatccgg
gtagggcacaaggctgagaagcaccagcggggctcggagtacgacttcgtgctggaagac
caggtcgactttgtcaaggacgccatctcctctgcagaggtgaactacctggaggagccc
gacgaggagagcgtgaaggagcggaggcatcggagcatgatggaggagaggatgtcgttg
ccgatctatccctacaggcagcagctgctggatgccatcgctgaggagcagattctgatc
atcgtgggggagacggggtcgggcaagacgactcagatcatgcagtacctgatcgaggcg
ggatactgcgatggaggcagcaagattgcatgcacgcagcctcgtcgtgtggcggccatg
agtgtcgccaagagggtggcagacgagatggactgcaagctgggacacgacgtggggtac
aagatccgcttcgaggactcgacgtcggagaagaccaagttgatctacatgaccgacggg
atgatgctgcgcgagttccttggggagccagacatggcctcctacagcgtcatcatggtc
gacgaggcgcacgagcgaactctgcacacggatgttctgttcggcctggtgaaggacgtt
gctcgcttccgtcacagggactctgagctgggagaactgaagctgctcatctcctccgct
accatggacgcccagaagttccacgagtacttcgacggcgctcccatcttcaccatcccc
ggtcgtcgctaccccgtcgacgtcttctacacgaaagcgccggaggcgaactacctggag
gccgcggtcgtgaccgtcttgcagatccacgtgacgcaagggaagggcgacatccttgtg
ttcatgccggggcagcaggagatcgaagcgacggtcgagctgctcaacgagaggaccaag
ggctttggtacgaagctgggtgagctgatcatcctccccgtctactccaccctcccctcc
cacgagcaggcgaagatcttcgaggacactccgcctggtgcgcgcaaggttgtgattgcg
accaacatcgccgaaacgtcgctcaccatcgacggcatcgtcttcgtcatcgacccgggc
ttcgtcaagcagaagtccttcaacccccgcagcggcatggagagcctcgtcgtcactcag
atctctaaggctgctgcccagcagcggtcggggagggcaggacgtacagcccctgggaaa
tgcttccggtga
DBGET
integrated database retrieval system
