Guillardia theta: GUITHDRAFT_156829
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Entry
GUITHDRAFT_156829 CDS
T02925
Name
(RefSeq) U3 small nucleolar RNA-associated protein, U3snoRNP
KO
K14549
U3 small nucleolar RNA-associated protein 15
Organism
gtt
Guillardia theta
Pathway
gtt03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
gtt00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
GUITHDRAFT_156829
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gtt03009
]
GUITHDRAFT_156829
Ribosome biogenesis [BR:
gtt03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
GUITHDRAFT_156829
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTP15_C
WD40
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_EIPR1
ANAPC4_WD40
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
NBCH_WD40
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
Beta-prop_SPT8
WD40_RFWD3
PQQ_2
Beta-prop_DCAF12
PEP5_VPS11_N
KNTC1_N
Beta-prop_LRRK2
Mala_s_1-like
Beta-prop_WDR11_2nd
Motif
Other DBs
NCBI-GeneID:
17311648
NCBI-ProteinID:
XP_005841949
JGI:
Guith1_156829
UniProt:
L1K2Y6
LinkDB
All DBs
Position
Unknown
AA seq
501 aa
AA seq
DB search
MAEHGDGFRKLEMQRAPRAPEASTPEQRHWRRYKTSLVTKAYAAVHCVAFSPAAPYDFAV
TNSTRVQIYGSRGKAVKKTISRFKDIVYTTSFRDDGKLLVAAGEERIVKVFDVESGGMLR
MLKGHSKPVHSCGFSRDRLHCISGGDDAVVKYWDVATGEETMNLEGHKDHVRCVTTSPTS
QDVVVSGSYDHTVKLWDCRKGASVLTVDHGGPVQAVLMLPGGGVMVTAGGNVMKVWDVLA
GGRVLHAMANHSKPITCLAYDENGGRILSGSLDHHLKVYDVQEYRVRYSLDYQQPILSLG
FSQNQSTIAVGMANGLLNVRSRPTEEEKLSKVKAKKNPRGGTFQYFIRGQYDKANEEDDF
RVERIRKQKLAPYDKMLKKFPYGTALDAALRTTNPLIIASLLHELYVRDCARIALSGRDD
TTLIPILKFICKYISVQTYTSLLTDVSNTILELYTVIIGRSEAVDELLWKIRMRVHEQLM
MDANLVALQGSLELILASTLH
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atggcggaacacggcgatggcttcaggaagctcgagatgcagcgagcgccgcgggcacca
gaggcctcgacgcccgagcagagacactggaggagatacaagacgagcctggtcaccaag
gcctatgcagctgtgcattgcgtcgctttctctcctgctgccccctacgattttgccgtc
accaactctaccagagtgcagatctacgggtcaagggggaaggcagtgaagaagacgatc
agcaggttcaaggacattgtatacaccaccagcttcagagacgacgggaaacttctcgtc
gcagcgggggaggagcgcatagtgaaagtgttcgatgttgagtcaggaggtatgctcaga
atgctaaagggccactcgaagccggtgcattcatgcggcttttccagagacaggctccat
tgcatctcaggcggggacgacgctgtcgtgaagtactgggatgtggcgactggagaagag
accatgaatcttgaaggacacaaggaccacgttcgctgcgtcactaccagcccgacttca
caggacgtagtcgtttctggctcctacgaccacactgtgaagctgtgggactgtaggaag
ggggccagcgtgcttacggtggatcatggcgggccagtgcaagcggtgctgatgctgccg
ggaggaggagtgatggttacggcgggggggaacgtgatgaaggtgtgggacgtgctggca
ggaggccgggtgctacatgccatggcgaaccatagcaagcccatcacctgcctggcgtac
gatgagaacggcgggaggatcctctccggttctctggaccatcatctgaaagtctacgat
gtacaggagtacagagttcgttacagtcttgactaccaacagcccatcttgtcgctcggc
ttcagtcaaaatcagagcacgatcgctgtgggcatggcgaacggcctgctgaacgtccgg
tctcgtccgacggaggaggagaagttgtcaaaggtcaaagccaagaagaacccacgggga
gggaccttccagtacttcatccgtgggcagtacgacaaggccaacgaggaggacgacttc
cgtgtggagaggattcggaagcagaagctggctccctacgacaagatgttgaagaagttt
ccatacgggaccgcgctggatgcagctctgaggacgacgaacccacttatcatcgcaagt
ctcctccacgagctctacgtcagagactgcgctcgcatcgctctctccgggagggacgac
accaccctcatccccatcttgaagttcatctgcaagtacatctccgtccagacttacacc
tcgctgctcactgacgtcagcaacaccatcctcgagttgtacacggtcatcattggcaga
tcggaggctgtcgacgaacttctctggaagatcaggatgcgcgtgcatgagcagcttatg
atggacgccaacttggtcgcgctgcaaggaagtctagagctcatcctcgcctccaccctt
cactaa
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integrated database retrieval system
