Guillardia theta: GUITHDRAFT_157194
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Entry
GUITHDRAFT_157194 CDS
T02925
Symbol
Pms1
Name
(RefSeq) Pms1 mismatch repair mutL
KO
K10858
DNA mismatch repair protein PMS2
Organism
gtt
Guillardia theta
Pathway
gtt03430
Mismatch repair
gtt03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
gtt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
GUITHDRAFT_157194 (Pms1)
03460 Fanconi anemia pathway
GUITHDRAFT_157194 (Pms1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gtt03400
]
GUITHDRAFT_157194 (Pms1)
DNA repair and recombination proteins [BR:
gtt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
GUITHDRAFT_157194 (Pms1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_mis_repair
MutL_C
HATPase_c_3
HATPase_c
SnAC
DUF3106
Motif
Other DBs
NCBI-GeneID:
17308206
NCBI-ProteinID:
XP_005838471
JGI:
Guith1_157194
UniProt:
L1JSF6
LinkDB
All DBs
Position
Unknown
AA seq
629 aa
AA seq
DB search
MQSKNIKAIDASSVHRICSGQVILDPSSALKEVVENAVDAGATKVDVKLKDYGLEVIEVC
DNGSGISPGDFELLACKHTTSKLRRFDDLNSLTTFGFRGEALSSLCAICEKVTITTRTAN
EVIATKLEYDKNGKLRGSSTCAREVGTTVTLDTIFKALPVRYKDFQKNKTREFQRLTRRL
QAYAIIHSDVRITCVNQTPKGKASVFSTPGNNSMLDCVTSIYGAKQKDSLTAIELRGEHV
TCSGYISKASSGCGLSSGDRQFLYLNKRPVDIPKLSKAINEVYKMYNMHQYPIYFLNIQL
STDTYDVNVTPDKRQIMFHDESRLIEFVKENLRNLFEPSRNNIPSPTASVELLHPRNGHV
DQPEPTGETTLQVEADWEAVKQKLRKDAEEGSEATEKLKREGRKRKRRNYEDAVTNLHER
VISKSDFTRMKILGQFNLGFIIARLDSDLFILDQHACDEKYRFELLEQTTSLKSQPLVVP
KELELEAADEMLVQENLDVFRANGFELKIDEEAPPTKRVKLTSIPFSKSTVFGPADVHEM
LCLMREDSGSAQRPSRVRAMLASRACHSAVTIGKHLTRQQMRVIVDHMSSMEQPWNCPHG
RPTMRHLFDLAEVEEEHEKLIYEGPAVVR
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgcagagcaagaacatcaaggcaatcgatgcctcgtctgtgcatcggatatgctcggga
caggtcattctggatccatcatctgctctcaaggaggtggtggagaatgcagttgatgct
ggagcaaccaaggttgatgtcaagctgaaagactacgggttggaggtgatcgaggtgtgc
gacaatggttcgggcatctctccgggagacttcgagcttctggcctgcaagcacacaact
tcgaaactgaggaggttcgacgacctcaacagtctcaccaccttcggtttccgcggcgag
gctctgagctcgctgtgcgccatctgcgagaaagtgacgataaccacgagaacggcgaac
gaagtgatcgccaccaagttagagtatgacaagaatggcaagctgcggggctcttcgacg
tgcgctcgagaagttggcactacagtgacgctggatacgatcttcaaggcccttcctgtg
agatacaaggacttccagaagaacaagactcgagagttccagaggctgacaaggaggctg
caggcgtacgcgatcattcacagtgatgtccgcatcacttgtgtcaaccagacgcccaag
gggaaagcttctgtattctcaacccctgggaacaacagcatgttggactgcgtcaccagc
atctacggcgcaaagcaaaaggactctctgacggcaatcgagctgaggggtgaacatgtc
acctgctctgggtacatctccaaggccagctcgggatgtggtttgagctcgggagacagg
cagtttctttacctgaataagcgacctgtcgatatccctaagttgtccaaggcgatcaac
gaggtttacaagatgtacaacatgcaccaatatcccatctacttcttgaacattcaactg
tcgacagacacctatgatgtgaacgtgacccccgacaaacggcagatcatgtttcacgat
gagtctcgactcattgagttcgtcaaggagaaccttcggaacctgttcgagccttcgcgt
aacaacatcccgtctccaacagcgagtgtagaactcctacatccgaggaatgggcacgtc
gatcaaccggagccgacgggagagacaacgttgcaggttgaggcagattgggaagcagtg
aagcaaaagctgcgcaaggatgcagaagaaggttcagaggctacggagaaactcaagagg
gaagggcggaagaggaagaggaggaactacgaggacgcggtgacaaacctgcacgagcgg
gtgatctccaagagcgacttcacccgcatgaagatactcggccagttcaacctaggcttc
atcatcgctcgactcgactccgacctcttcatcctcgaccagcacgcgtgcgacgagaag
tacaggttcgagctcctggagcagacgaccagcttgaagagtcaacctctcgtcgtgccc
aaggagcttgagctggaggctgcagacgagatgctcgtccaggagaacctggatgtcttc
agggccaacggcttcgagctcaagatcgacgaggaggcgccgccgacgaagagggtgaag
ctgacgtccatcccattcagcaagagcacagtcttcggtcctgccgacgtccatgagatg
ctctgcttgatgcgcgaggactcgggctctgcccaaagaccttctcgagttcgggctatg
ttggcgtctcgagcttgccactcggctgtgaccatcgggaagcatctgacaagacagcag
atgcgagtcatcgtcgatcacatgagcagcatggagcagccttggaactgtccgcatggg
aggccgaccatgagacatctcttcgacttggcggaggtggaggaggagcatgaaaagttg
atctacgagggtccagctgttgtgcgatga
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integrated database retrieval system
