Guillardia theta: GUITHDRAFT_157206
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Entry
GUITHDRAFT_157206 CDS
T02925
Symbol
POLD1
Name
(RefSeq) DNA polymerase delta catalytic subunit
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
gtt
Guillardia theta
Pathway
gtt03030
DNA replication
gtt03410
Base excision repair
gtt03420
Nucleotide excision repair
gtt03430
Mismatch repair
gtt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gtt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GUITHDRAFT_157206 (POLD1)
03410 Base excision repair
GUITHDRAFT_157206 (POLD1)
03420 Nucleotide excision repair
GUITHDRAFT_157206 (POLD1)
03430 Mismatch repair
GUITHDRAFT_157206 (POLD1)
03440 Homologous recombination
GUITHDRAFT_157206 (POLD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gtt03032
]
GUITHDRAFT_157206 (POLD1)
03400 DNA repair and recombination proteins [BR:
gtt03400
]
GUITHDRAFT_157206 (POLD1)
Enzymes [BR:
gtt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GUITHDRAFT_157206 (POLD1)
DNA replication proteins [BR:
gtt03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
GUITHDRAFT_157206 (POLD1)
DNA repair and recombination proteins [BR:
gtt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
GUITHDRAFT_157206 (POLD1)
MMR (mismatch excision repair)
DNA polymerase delta complex
GUITHDRAFT_157206 (POLD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
DNA_pol_B_2
divDNApol
REV3_N
Motif
Other DBs
NCBI-GeneID:
17308334
NCBI-ProteinID:
XP_005838630
JGI:
Guith1_157206
UniProt:
L1JTX0
LinkDB
All DBs
Position
Unknown
AA seq
985 aa
AA seq
DB search
MRLYGVTAEGHSAVVHVHGYDPYFYVQAPKEINENICQEIAETLNRRMAERVDSSKKTSN
GQYIRYVEMEYKQTIWNYRQEDFVKFLKISTVWPQHVTTARSILENGIQISNLGTRTFLT
YESNVVFVMRYMVDAGIVGANWITLPANQYLTRSNPNTTCQFEMDVMWQKLISHDPDGDW
LKIAPLRILSFDIECAGRKGCFPEPDKDPVIQIANWVTIQGMDTPIVKNIFTLKSCAAIS
GAEVHSFEDESEMLQGWRDFVIACDPDILTGYNIVGFDIPYLMDRAKALKVASFPVLGRM
KNSKTKIKKTTFSSAQMGTRETNEISIDGRVIFDVLQAIQREYKLHSYTLNSVCAKFLGE
QKEDVHHSIISDLQNGDAESRRRLAVYCLKDAYLPQRLLDKLMFIYNYVEMARVTGVPIG
WLLVRGQMLKVMSQLLRKARSKGLLLPNLKVESTDEKFEGAIVIEPKKGFYSDPIATLDF
ASLYPSIMMAHNLCYSTLVSKEDLRTNKFNFTPEQITVTPHGDTFVKPSVKKGILPEILD
ELLAARKRAKADLKKATDPIMKAVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISSSVT
AFGREMIELTKAKVEAHYTVANGYKHDSVVVYGDTDSVMIKFGENRERWMIDETMKLALS
AADFVNTSFVKPIKLEFEKVYYPYLLMNKKRYAALLWTNPDKFDKMDCKGIETVRRDNCG
LVRTMVDTCLKTILMQRDPNAAAEYVKGVIRDLLMNKVDISELIITKALHKSEEDSKSAQ
AHVVLAARMKERDPNTAPVLGDRVPYVIIKGPKGAKAFEKAEDPIFVLENNLPIDVQHYL
DHQLSQPILRLFEPILDKPQSLLSGDHTRQISLSTPTTGGLMKFVKATKTCLGCRTPLKD
ERATVCEHCKPKEVLFKVAVRSIDNLNHMQTQFAKLWTQCQRCQGSLHMEVICTSRDCPI
FYRRRKAHKDLIEAQKTAERFSLSW
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttgtatggtgtcacggccgaagggcacagtgctgttgtacatgtccacggctat
gatccatacttctatgttcaggctccaaaggaaatcaacgaaaatatctgtcaagagatt
gctgaaactttgaaccgaagaatggcggaacgtgttgattcctcgaagaagacaagtaat
ggtcaatacattcggtacgttgagatggaatacaagcaaacaatctggaattatcgacaa
gaggactttgtcaaatttttgaagatttcaactgtatggccacagcatgtcactacagct
cgttcaatattggaaaatggaattcaaatatctaatctagggactcgcactttcttgact
tacgaatccaatgtcgtttttgtcatgcgctacatggtagatgctgggatcgtgggtgca
aactggattaccctcccagcaaaccagtacctaacgaggtcgaatccaaacacgacatgt
caatttgaaatggatgtcatgtggcaaaaattgatcagtcacgatccagatggagattgg
ttgaagattgctccactcagaattttgagttttgatattgagtgtgctggaagaaagggc
tgctttccagaacctgacaaggaccctgtcatccagattgcgaactgggttactatccaa
gggatggatacacctattgtcaaaaatattttcactctgaaatcttgcgctgcgataagc
ggtgcagaagtgcactcattcgaggatgaaagcgaaatgctccaaggctggagggacttt
gtcatcgcttgtgatccagacatattgactggatacaacattgtgggcttcgatattcca
tacctcatggacagagcgaaagcgctgaaggtcgcttcatttcccgttttgggcagaatg
aaaaatagcaaaaccaagatcaaaaagacaaccttttcttcagctcagatgggaacaagg
gagacaaatgaaatatcaattgatggaagggttatctttgatgtcctccaggcaattcaa
cgcgagtacaagttacattcatacactttgaattcagtttgtgccaagtttcttggagag
caaaaggaagacgttcatcattcaatcatctcagatttgcagaatggagatgctgaatcg
cgccgtcgccttgcagtatactgtctgaaggatgcatatcttcctcagcgtctcttggac
aaattgatgttcatttacaactacgttgaaatggcgagagtgacaggagtgcccattggt
tggctccttgttcgcggacagatgctcaaagttatgtctcagctactgcgcaaggcccgt
tccaagggcctactgctgccaaatttgaaggtagaatccaccgacgagaagtttgaaggt
gccattgttattgaacccaagaaaggcttctacagtgatcctattgcaactttggacttt
gcttcgctttacccctctatcatgatggcacataacctttgttattctactcttgtcagc
aaagaagacttgcgaacgaacaaatttaattttacgccggaacaaattactgtcactcca
catggtgacacctttgtcaagccaagcgtaaagaaaggcattcttcctgagattttggat
gagcttttggccgcccgaaagcgagcgaaggctgatttgaagaaagccacggatccgatc
atgaaggctgttcttgacggacggcagcttgcgctcaaagtcagtgcgaactccgtttat
ggcttcacgggagcgcaagtgggtaaactgccttgtctggaaatctcttccagcgtcaca
gcgttcggacgtgaaatgattgaacttacaaaagcaaaagtggaggcacattataccgtt
gccaatggatacaagcatgacagcgtcgttgtgtatggtgatacggactccgtaatgatc
aagttcggtgaaaatcgtgaaagatggatgattgacgagactatgaagcttgccctgtcc
gccgcagattttgtcaatacatcttttgtaaaaccgattaagctagaattcgaaaaggtt
tactatccgtatttgttgatgaacaagaagcgatatgctgctcttctttggacgaatccg
gacaagttcgataagatggattgcaaaggaattgaaactgtgaggagagacaattgtggt
cttgtccgaaccatggtggacacctgcttaaaaacaattttgatgcaacgagatccgaat
gcagctgcggaatacgtgaagggtgtgattcgtgatcttctgatgaacaaagttgatatc
agcgagttgatcatcaccaaggctctacacaagtctgaagaagactcaaagagcgcgcaa
gcacacgtcgtcttagctgccaggatgaaggagcgagatccaaacactgctcctgtgctc
ggcgaccgtgtgccctatgtaattatcaaaggtccgaaaggagcgaaggcctttgaaaag
gctgaagatcctatctttgtactggagaacaatttgcctatagatgtgcagcattaccta
gaccaccagctttcacagcccatcctgcgtttattcgaacctatcctggataaacctcag
tctttgctttctggagaccacactcgccagatatctttgtccacccctacgaccggtggc
ttgatgaaattcgtcaaagccaccaagacctgcttgggctgccgcactccgttgaaagat
gagcgagctaccgtttgtgaacactgcaagcccaaagaggtgttgttcaaggttgccgta
cgcagcattgacaacttgaaccacatgcaaactcagttcgccaagttatggactcagtgc
cagcggtgtcagggatctctacacatggaagtcatctgtacgtcaagggattgccccatc
ttctaccgaaggcgaaaggcgcacaaagacttgatcgaggctcagaagacggccgaaaga
ttctctctcagctggtaa
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