Guillardia theta: GUITHDRAFT_157257
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Entry
GUITHDRAFT_157257 CDS
T02925
Name
(RefSeq) hypothetical protein
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
gtt
Guillardia theta
Pathway
gtt03018
RNA degradation
gtt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gtt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
GUITHDRAFT_157257
09123 Folding, sorting and degradation
03018 RNA degradation
GUITHDRAFT_157257
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gtt03019
]
GUITHDRAFT_157257
03041 Spliceosome [BR:
gtt03041
]
GUITHDRAFT_157257
Messenger RNA biogenesis [BR:
gtt03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
GUITHDRAFT_157257
mRNA degradation factors
5'-3' decay
Lsm complex
GUITHDRAFT_157257
Spliceosome [BR:
gtt03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
GUITHDRAFT_157257
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
17307394
NCBI-ProteinID:
XP_005837848
JGI:
Guith1_157257
UniProt:
L1JS17
LinkDB
All DBs
Position
Unknown
AA seq
96 aa
AA seq
DB search
MAKKLSSLIDSPVSIITNDGRNIIGTLKGLDQKLNVILEECYERVFSKEAGVEQVTLGLY
IVRGDNIAIVGEVDEHKDSGTDWTSIKAEPLKHIVH
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaagctttctagtctcatcgactctcctgtttcaatcattacaaatgatggg
agaaatattatcggaacattgaaaggactagatcagaagctgaatgttatattggaagag
tgctacgagagagttttttcaaaagaagcaggcgtcgagcaggtgacactaggtttgtat
attgttcgaggagacaacattgcaatagtgggggaggtggacgagcacaaggatagcggc
acggattggacatccatcaaggcagagcccttgaaacacatcgttcactaa
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integrated database retrieval system