KEGG   Guillardia theta: GUITHDRAFT_157257
Entry
GUITHDRAFT_157257 CDS       T02925                                 
Name
(RefSeq) hypothetical protein
  KO
K12627  U6 snRNA-associated Sm-like protein LSm8
Organism
gtt  Guillardia theta
Pathway
gtt03018  RNA degradation
gtt03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:gtt00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    GUITHDRAFT_157257
  09123 Folding, sorting and degradation
   03018 RNA degradation
    GUITHDRAFT_157257
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gtt03019]
    GUITHDRAFT_157257
   03041 Spliceosome [BR:gtt03041]
    GUITHDRAFT_157257
Messenger RNA biogenesis [BR:gtt03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     GUITHDRAFT_157257
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     GUITHDRAFT_157257
Spliceosome [BR:gtt03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    GUITHDRAFT_157257
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 17307394
NCBI-ProteinID: XP_005837848
JGI: Guith1_157257
UniProt: L1JS17
LinkDB
Position
Unknown
AA seq 96 aa
MAKKLSSLIDSPVSIITNDGRNIIGTLKGLDQKLNVILEECYERVFSKEAGVEQVTLGLY
IVRGDNIAIVGEVDEHKDSGTDWTSIKAEPLKHIVH
NT seq 291 nt   +upstreamnt  +downstreamnt
atggcgaagaagctttctagtctcatcgactctcctgtttcaatcattacaaatgatggg
agaaatattatcggaacattgaaaggactagatcagaagctgaatgttatattggaagag
tgctacgagagagttttttcaaaagaagcaggcgtcgagcaggtgacactaggtttgtat
attgttcgaggagacaacattgcaatagtgggggaggtggacgagcacaaggatagcggc
acggattggacatccatcaaggcagagcccttgaaacacatcgttcactaa

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