KEGG   Guillardia theta: GUITHDRAFT_158223
Entry
GUITHDRAFT_158223 CDS       T02925                                 
Name
(RefSeq) hypothetical protein
  KO
K15542  polyadenylation factor subunit 2
Organism
gtt  Guillardia theta
Pathway
gtt03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:gtt00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    GUITHDRAFT_158223
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gtt03019]
    GUITHDRAFT_158223
Messenger RNA biogenesis [BR:gtt03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     GUITHDRAFT_158223
SSDB
Motif
Pfam: WD40 Beta-prop_WDR5 Beta-prop_IFT122_1st Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_Prp19 Beta-prop_WDR3_2nd WD40_Gbeta Beta-prop_EML_2 WD40_WDHD1_1st WDR55 Beta-prop_IFT140_1st Beta-prop_EML EIF3I Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_2nd ANAPC4_WD40 Beta-prop_WDR36-Utp21_2nd Beta-prop_Aladin Beta-prop_CAF1B_HIR1 DSE1_N Beta-prop_WDR90_POC16_2nd ASA1 Beta-prop_EIPR1 WD40_MABP1-WDR62_1st Beta-prop_NOL10_N Beta-prop_RIG_2nd Beta-prop_DCAF4 Beta-prop_WDR19_1st WD40_MABP1-WDR62_2nd CFAP251_N Beta-prop_TEP1_C NBCH_WD40 Beta-prop_SPT8 WD40_RFWD3 Beta-prop_WDR41 WDR90_beta-prop_4th Beta-prop_WDR75_1st Beta-prop_SCAP Beta-prop_WDR35_TULP_N PEP5_VPS11_N eIF2A Beta-prop_Vps41 Beta-prop_WDR11_2nd Tricorn_2nd Beta-prop_VPS8 WDR54 PAC11 WD_LRWD1 WD40_like Methyltransf_22 TP_0598_N Beta-prop_ACSF4 Cytochrom_D1
Other DBs
NCBI-GeneID: 17298003
NCBI-ProteinID: XP_005828330
JGI: Guith1_158223
UniProt: L1IZV7
LinkDB
Position
Unknown
AA seq 406 aa
MRVFDGKRGRKQPKRKCVDFNSSSLAHLHSRVLFRDYRDLQDIQPSLAYDKKLRPAYSCH
ENPASCVTTKLADTSVNKNNAYSHRCPVFAIAWTPEGRGLVAGNSQGEFTLWDGYEFNFL
TIWQGHDQSVQSMTWSHNGEFMVSADKTGLIKYWMNNMNEVKKFQGHKDSIRSISFSPSD
LKFVTGGDDCVLKIWDFETGTEERAITGHHWDVKCCHWHPYKPLILSGGKDHKVKLWDAR
SGSCLDTIHAHKNTVRACEWSSNGNWFFTGGRDQKVKLYDLRRTNEAVLTFNGHKNEVTS
LAVHPFYETLFVTGDYSGSILYWSTNSDEPIAARQSGEQGAHEACIWSLAWHPLGHILCS
GANDHTCKFWCRNRPGEGTIAACLEGGTMARLMARGGWAATDKEWR
NT seq 1221 nt   +upstreamnt  +downstreamnt
atgcgggtgttcgacgggaagagggggaggaagcagccgaagaggaagtgtgttgacttc
aactcctcctctctcgcccacctgcactcccgcgttctcttccgcgactaccgtgacctg
caagacatccagccgtctctggcctacgacaagaagcttcgccctgcctactcctgccat
gaaaaccctgcgagctgcgtgaccacgaagctggcagacacatcggtgaacaagaacaac
gcctactcccatagatgccccgtattcgccatcgcgtggacccccgaaggtcgagggctg
gtagcagggaactcgcaaggggagttcacgttatgggacggttacgagttcaacttcctc
accatctggcaggggcacgatcagtctgtgcagtcaatgacttggagccacaacggagag
ttcatggtgtcagcagacaagacggggctgatcaagtactggatgaacaacatgaacgag
gtcaaaaagttccaggggcataaggactcgatccgatcgatcagcttctcgccctcagac
ctcaagttcgtcacgggaggagacgactgcgtgctcaagatctgggacttcgagacgggc
acggaggagcgggcgatcactgggcaccactgggatgtcaagtgctgccattggcaccct
tacaagccactgatcctctcgggagggaaggaccacaaagtgaagctctgggacgcgagg
agcggcagctgcctggacaccatccatgcgcacaagaacacggtgagagcgtgcgagtgg
agctccaacggcaactggttcttcacgggaggcagagaccagaaagtgaagctgtacgac
ctgcgcagaaccaacgaagccgtgctgacgttcaacgggcataagaacgaagtcacttcg
cttgctgtccatcccttctatgagaccctcttcgtcacgggcgactacagtggttccatc
ctctactggtccaccaacagcgacgagcccatcgctgcccgtcagagtggagagcaggga
gcgcatgaagcatgcatctggtccctcgcctggcaccctcttggtcacatcctctgcagc
ggcgccaatgaccacacttgcaagttctggtgtcgcaatcgtcctggtgaaggaacgatc
gcggcatgcctcgaaggggggacgatggcgcgcctgatggcccggggcggatgggcggcg
acagacaaggaatggaggtga

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