Guillardia theta: GUITHDRAFT_159747
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Entry
GUITHDRAFT_159747 CDS
T02925
Name
(RefSeq) hypothetical protein
KO
K10752
histone-binding protein RBBP4
Organism
gtt
Guillardia theta
Pathway
gtt03082
ATP-dependent chromatin remodeling
gtt03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
gtt00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
GUITHDRAFT_159747
03083 Polycomb repressive complex
GUITHDRAFT_159747
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gtt03036
]
GUITHDRAFT_159747
Chromosome and associated proteins [BR:
gtt03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
GUITHDRAFT_159747
Histone modification proteins
HAT complexes
HATB complex
GUITHDRAFT_159747
HDAC complexes
Sin3A-HDAC complex
GUITHDRAFT_159747
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
GUITHDRAFT_159747
PRC2.2
GUITHDRAFT_159747
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
GUITHDRAFT_159747
Heterochromatin formation proteins
Other heterochromatin formation proteins
GUITHDRAFT_159747
Chromatin remodeling factors
NuRD complex
GUITHDRAFT_159747
NuRF complex
GUITHDRAFT_159747
NuRF complex (fruit fly)
GUITHDRAFT_159747
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_RIG_2nd
CAF1C_H4-bd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_EML
ANAPC4_WD40
Beta-prop_DCAF12
NBCH_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_WDR19_1st
WD40_RFWD3
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
Beta-prop_SCAP
eIF2A
Beta-prop_RIG_1st
Beta-prop_Vps41
WD_LRWD1
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
17300917
NCBI-ProteinID:
XP_005831313
JGI:
Guith1_159747
UniProt:
L1J723
LinkDB
All DBs
Position
Unknown
AA seq
400 aa
AA seq
DB search
MAAKILGVDDDLEDKFINEQYKNWKVNSRYLYDVVLSHALDSPSSTVQFLPEKYDAPGKG
LQEKRVLIGTDTSDSEQNYLLLAKGTNRARVEIIQRINHDGEVKRARYMPQKPTIIATKA
PSAEVFVFDYTKQPAKPDTDGVCSPDLKLVGHDKEGYGISWSTLDAGMLLSGSEDSTVCL
WNVEATHSNHQAVEPISVFKGHTGSVEDVAWHILKPKMFGSVGGDNQLMIWDTSMADKKP
AQKVNAHSAEINCLSFNPFNEYLLATGSADKTVALWDLRNTAAKLHAFECHTDQVIQVQW
SFAYETILGSCGQDRKVAVMDISRIGDEQSKEDAEDGPPELLFVHGGHTSKVTDFCWNPH
DPWLVGSVDENCVLQIWQMASHIYKDDDDDGSDIPAKDLE
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atggccgccaaaattctgggggtcgatgatgatctcgaagacaagttcatcaacgaacag
tacaagaactggaaagtgaactcaagatacctgtatgacgttgtactctcgcatgccctg
gactcgccgagctcgaccgttcagttcctgccagagaaatacgacgctccggggaagggg
ttgcaggagaagagagtgctgatcggaacagataccagcgactccgagcagaactacttg
ttgcttgcaaagggaacgaacagagcacgggtagaaatcatccagagaataaatcatgac
ggagaggttaagagggctcgatacatgcctcaaaagccaaccattatcgcaaccaaggca
ccatcggcagaagtttttgtcttcgattacaccaagcaaccagcaaaaccagatacagat
ggagtttgcagccctgatctgaagttagttgggcacgacaaggaagggtatgggatctcg
tggagcacgttagacgcaggaatgcttcttagcgggtctgaagattctaccgtctgtcta
tggaacgtggaggcgacacattcgaatcatcaggccgttgagcccatcagcgtcttcaag
gggcacacaggctcggtagaagatgtagcatggcacatcctgaaaccgaagatgttcgga
tcggtcggaggcgacaaccaacttatgatatgggatacaagcatggcggacaagaagcca
gcacagaaagtgaacgcgcactctgctgagatcaactgcctttccttcaaccccttcaac
gaatacctcctagccaccggatctgcagacaagactgttgccctctgggatctacgcaac
acagcagcaaagctgcatgccttcgagtgccataccgatcaggtcatccaggtccagtgg
tccttcgcctacgaaaccatcttgggatcctgcggtcaggacaggaaggtggcagtcatg
gacatcagcaggatcggcgatgagcaaagcaaggaggatgcagaggacgggccgcccgaa
ctgctgttcgttcatggaggacacacctccaaagtgacagacttctgctggaaccctcac
gacccctggctggtgggctcggtggacgagaactgtgtactgcaaatctggcagatggct
tcgcacatctacaaggatgacgatgacgatggctccgacatcccagcgaaggacttggaa
tga
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