Guillardia theta: GUITHDRAFT_160531
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Entry
GUITHDRAFT_160531 CDS
T02925
Symbol
RFC1
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
gtt
Guillardia theta
Pathway
gtt03030
DNA replication
gtt03410
Base excision repair
gtt03420
Nucleotide excision repair
gtt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gtt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GUITHDRAFT_160531 (RFC1)
03410 Base excision repair
GUITHDRAFT_160531 (RFC1)
03420 Nucleotide excision repair
GUITHDRAFT_160531 (RFC1)
03430 Mismatch repair
GUITHDRAFT_160531 (RFC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gtt03032
]
GUITHDRAFT_160531 (RFC1)
03400 DNA repair and recombination proteins [BR:
gtt03400
]
GUITHDRAFT_160531 (RFC1)
DNA replication proteins [BR:
gtt03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
GUITHDRAFT_160531 (RFC1)
DNA repair and recombination proteins [BR:
gtt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
GUITHDRAFT_160531 (RFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT
AAA
AAA_22
RCF1-5-like_lid
RuvB_N
AAA_lid_RFC1
Rad17
nSTAND3
AAA_5
AAA_assoc_2
AAA_30
AAA_2
BRCT_2
AAA_33
RFC1
Sigma54_activ_2
AAA_14
AAA_28
AAA_18
AAA_19
NPHP3_N
NTPase_1
AAA_7
PTCB-BRCT
Parvo_NS1
Mg_chelatase
Zeta_toxin
AAA_17
AAA_3
IstB_IS21
S-Me-THD_N
AAA_24
Motif
Other DBs
NCBI-GeneID:
17311421
NCBI-ProteinID:
XP_005841805
JGI:
Guith1_160531
UniProt:
L1K313
LinkDB
All DBs
Position
Unknown
AA seq
821 aa
AA seq
DB search
MLHEEQQAAQPSTCSDDDDDDCVYVTPKQVVPSWEVLRANLKLLADVKEGDKLVIAGDTV
RIDSAGMFGSVTRWLSSQGRTQTLAWLSRFASDLSRFQSLLQAGVGVSTDNFAETKFHSR
TRDEVVNDLRKELTPCIDGLKRLRNTYNEDRWAVQRLDKVISDLSQLQYEMHRARGDIVA
MNQGPMMRIKGGGREGASGKREMQGEAEGSKAKKAKTAGGFFYVNRKPPPHYGTKPIPTG
DPDCLKGMQFVISGVLDSLEREEAAHLIQTHGGKVVSAVSGKVTHALVGEEAGETKMKKI
REMGTIKTLTEDELLNLISSSRKGHTNQVKLITNWLKGFLPESKGSNQDGKQQNIILMTG
PPGLGKTTIAHVLANFLGFEIVEINASDDRSADEIDQVLGGMMGNQPITNFFAPRGTAVV
KKSKPLLLIMDEVDGMTSGEKGGVQKLIQLATSKRDRLPIICICNDEHAKALRIRFYHLK
GREVLPRLKEVCRLEQFKNVEDSALLTIAEIANGDLRTMINILQLARSSSDVLTLEMVDP
SWMVRKKYMEMGKTHESLTVFTLADSFFKVLGMWGRGCGEHGELSIAKQAKRNGADLWMF
IGLETCVFPGYYLEGKLEGRMRFPTKFARQRAFERDKKMKCCSPQKVWAPNEVGQHASLL
TFAPVRRHRIPELAAWLGHPMEMAGTNQTLISIVAPFVVDSMDAHGLILEDLEFIMRMDD
HPPNYNRYLNFSAPMKSAVEQIYYERHGKPGKEIVRVGGQRKRSKDSRLSAEDSSSLRSK
QEASLESSKSEEDEEAGEDNEEEDSLARLREAIAEETRDLG
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atgctgcacgaggagcagcaggcggctcagccgtcgacatgcagtgacgatgacgacgac
gactgcgtgtacgtgaccccgaagcaggtggtcccctcgtgggaggtgctgagagcgaat
ctcaagctgctggcggatgtgaaggagggagacaagctcgtcatcgccggcgacaccgtc
cgcatcgattcagctgggatgttcgggagcgtcacgcggtggctctcgtcgcaaggaagg
acgcagacgctcgcatggctctcaaggtttgccagcgacctctcgcgcttccagtcgctc
ttacaagcgggtgtgggggtctcgaccgacaactttgcagagaccaagttccacagcagg
acgcgcgatgaggtagtgaacgaccttcgcaaggagctcactccgtgtatcgacgggctg
aagagactgaggaacacctacaacgaggaccgatgggctgtgcagaggctcgacaaagtg
atctcagatctgtcgcagctccagtacgagatgcaccgtgccagaggcgacatcgtcgcc
atgaatcaaggtccgatgatgaggatcaagggtggagggcgagaaggagcatcggggaag
agagaaatgcagggagaggcagaaggcagcaaagcgaagaaggcaaagacagctgggggc
ttcttctacgtgaatcgcaagcctcctcctcactatggcacgaaacccatcccgaccggg
gaccccgactgtctcaaagggatgcagttcgtgatatcgggggtgctggactcgctggag
cgagaggaggctgcgcatctgatccaaactcatggggggaaggtcgtgtcggcggtcagc
gggaaggtcacccatgcgctagtaggggaggaggcgggagagacgaagatgaagaaaatc
cgggagatgggaacgatcaagactttgacggaagacgagctcttgaacctgatcagcagc
tctcgcaaagggcacaccaaccaggtcaagttgatcaccaactggttgaagggattcctc
ccagagagcaagggctcgaaccaagacgggaagcagcagaatatcatcctcatgacaggc
cctccgggtcttggaaagacgacgatcgcccacgtcctggccaatttccttggcttcgag
atcgtcgagattaacgcctccgatgatcgcagcgcagacgagatcgaccaggtgctgggc
gggatgatggggaatcagccgattacgaatttcttcgctcctcgcgggactgcggtggtg
aagaaatcaaagcctctcctcctgatcatggacgaggtggacggaatgacgtcgggggaa
aagggaggagtccagaaactgatacagctggcgacgtcgaagcgtgacaggctccccatc
atctgcatctgcaacgatgagcatgccaaggcgctgaggattcgcttctaccatctcaag
gggagggaggtgctcccaaggttgaaagaggtctgccgccttgagcaattcaagaacgtc
gaagactcagccctcctcaccatcgccgagatcgccaatggagacttgagaaccatgatc
aacatcctgcagctggccaggagcagcagcgacgtcctgacgctggagatggtagacccc
agctggatggtccggaagaagtacatggaaatgggcaagacgcatgagagtctgacggtc
ttcacgctcgcggactcgttcttcaaggtgttggggatgtgggggagaggatgtggagaa
catggagagctatcgatcgccaaacaggccaaacgaaacggcgcagatctgtggatgttt
atcgggctggagacgtgcgtcttccctggatactacctggaaggaaagctggaaggaagg
atgcggtttcctaccaagtttgcgaggcaaagggcgttcgagcgggacaaaaagatgaaa
tgttgttcccctcagaaggtctgggcgcccaacgaggtcggacagcatgcctcccttctg
acatttgccccagtcagaaggcatcggatcccggagcttgcggcatggctaggacatccc
atggagatggcgggtaccaaccaaaccctcatcagcattgtcgctccgtttgtcgttgac
tcgatggacgcgcacgggctgatactcgaggacctcgagttcatcatgcgcatggacgac
catcctcccaactacaacaggtacctcaacttctccgccccaatgaagagcgcggtggag
cagatctactacgagaggcacggcaaacctgggaaggagatcgtaagggttggaggacag
agaaagcgctcaaaggactcgcggctttcagcggaggattcttcgagcctgcggagcaag
caagaagcttcgctggaatcgtccaagtcggaggaggacgaggaggcaggggaggacaac
gaggaggaggacagccttgccaggctgcgagaagcgatcgcggaggagactcgcgatctg
ggctga
DBGET
integrated database retrieval system
