KEGG   Guillardia theta: GUITHDRAFT_161108
Entry
GUITHDRAFT_161108 CDS       T02925                                 
Name
(RefSeq) hypothetical protein
  KO
K12881  THO complex subunit 4
Organism
gtt  Guillardia theta
Pathway
gtt03013  Nucleocytoplasmic transport
gtt03015  mRNA surveillance pathway
gtt03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:gtt00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    GUITHDRAFT_161108
  09122 Translation
   03013 Nucleocytoplasmic transport
    GUITHDRAFT_161108
   03015 mRNA surveillance pathway
    GUITHDRAFT_161108
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gtt03019]
    GUITHDRAFT_161108
   03041 Spliceosome [BR:gtt03041]
    GUITHDRAFT_161108
Messenger RNA biogenesis [BR:gtt03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     GUITHDRAFT_161108
    TREX complex
     GUITHDRAFT_161108
Spliceosome [BR:gtt03041]
 Complex C
  Other components
   EJC/TREX
    GUITHDRAFT_161108
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    GUITHDRAFT_161108
SSDB
Motif
Pfam: RRM_1 Btz
Other DBs
NCBI-GeneID: 17309565
NCBI-ProteinID: XP_005839900
JGI: Guith1_161108
UniProt: L1JXI2
LinkDB
Position
Unknown
AA seq 248 aa
MDKSSKGKPRGRGGGGRGGAIRSGRGGNVGRRPAPYARRGGFGGGGFGRPADVFAEPPTG
GFYMHDDRTDPEPAAPKELSTAGVKMLVSNLAPGVTDQDLEELCEEHGGPVKSAEIFYKK
DGASTGQGEVVFRQRAHAEKVLKGLQGVPLDGLPLKLALVGVPAQAATSQPTMVTITGIG
APARGGYGGGGFGGGGFGGGGFGGGGFRPRRGAARGRGGRGGGGGGGGGRAAPSNEDLDK
GMDSYFQK
NT seq 747 nt   +upstreamnt  +downstreamnt
atggacaaatcgtccaagggcaaacctcgtggaagaggcggcggaggcagaggaggagct
attcgcagtggccgaggaggaaacgtcggcagacgtcctgcgccttacgccagacgagga
ggattcggtggaggaggcttcggacgccctgcagacgtatttgcggaaccaccaacaggc
ggattttacatgcatgatgatcgcacggatcctgagccggcggcgcccaaggagctttcc
actgcaggtgtgaagatgctcgtgtcaaacctggcccccggagttacggaccaggatttg
gaggagctctgtgaagaacacggtggacctgtgaagagcgccgagatcttttacaagaaa
gatggagcctcaactggtcagggtgaagttgtcttcagacagagagcacatgcggagaag
gtgctcaagggccttcagggagtcccgctcgacggtctccctttgaagctggcgcttgtt
ggcgtcccagctcaggccgctacctcgcagcccacaatggtgaccatcactggcatcggc
gctcccgcacgaggaggctacggaggagggggtttcggaggaggaggcttcggtggagga
ggcttcggaggaggaggattcaggcctagacgtggcgccgcgcgtggacgaggaggacgc
ggaggcggtggaggcggtggaggtggtcgtgctgcgccctccaacgaagatctggacaag
ggaatggactcctacttccagaagtga

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