KEGG   Guillardia theta: GUITHDRAFT_161305
Entry
GUITHDRAFT_161305 CDS       T02925                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit, RPB4
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
gtt  Guillardia theta
Pathway
gtt03020  RNA polymerase
gtt03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:gtt00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    GUITHDRAFT_161305
  09124 Replication and repair
   03420 Nucleotide excision repair
    GUITHDRAFT_161305
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:gtt03021]
    GUITHDRAFT_161305
   03400 DNA repair and recombination proteins [BR:gtt03400]
    GUITHDRAFT_161305
Transcription machinery [BR:gtt03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     GUITHDRAFT_161305
DNA repair and recombination proteins [BR:gtt03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      GUITHDRAFT_161305
SSDB
Motif
Pfam: RNA_pol_Rpb4
Other DBs
NCBI-GeneID: 17308795
NCBI-ProteinID: XP_005839082
JGI: Guith1_161305
UniProt: L1JUL1
LinkDB
Position
Unknown
AA seq 141 aa
MTSRQPPKKRKIEEKEDITNLYFGADFEDAEAMLNAEVKVIIDSINEEKDLEMSDWSELM
QNTTSNVSTFGRFQDKTSIATCKQELVDLGCHTFEAACFGNLQPANADEAKRLIPSLTRF
TDDAVEMMCQCVQRVKDVHDN
NT seq 426 nt   +upstreamnt  +downstreamnt
atgacgtcgagacaaccaccaaagaagagaaagatcgaggagaaagaagatattacaaac
ctttacttcggggccgattttgaggatgcagaagctatgcttaatgctgaagtcaaggtt
atcatcgacagcatcaatgaagaaaaagatttggaaatgtcagattggtctgagttgatg
caaaacactacttcaaatgtttccacctttggaaggttccaagataaaacatctatcgcg
acatgcaagcaggagctggtggatctgggatgccacaccttcgaagcagcttgcttcgga
aacctgcagcctgccaacgctgatgaggcgaagcgtctcatcccttctctcactcgcttc
accgacgatgccgtcgagatgatgtgccaatgcgttcagcgggtcaaagacgttcatgac
aactga

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