Guillardia theta: GUITHDRAFT_161357
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Entry
GUITHDRAFT_161357 CDS
T02925
Name
(RefSeq) hypothetical protein
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
gtt
Guillardia theta
Pathway
gtt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gtt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
GUITHDRAFT_161357
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gtt03041
]
GUITHDRAFT_161357
03009 Ribosome biogenesis [BR:
gtt03009
]
GUITHDRAFT_161357
Enzymes [BR:
gtt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GUITHDRAFT_161357
Spliceosome [BR:
gtt03041
]
Complex A
U1 snRNP components
U1 related factors
GUITHDRAFT_161357
Complex B
GUITHDRAFT_161357
Ribosome biogenesis [BR:
gtt03009
]
Eukaryotic type
Pre-60S particles
Helicases
GUITHDRAFT_161357
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
17308707
NCBI-ProteinID:
XP_005839267
JGI:
Guith1_161357
UniProt:
L1JV98
LinkDB
All DBs
Position
Unknown
AA seq
593 aa
AA seq
DB search
MKAKVVINAWGVVIAQSLCLYIALAETSNTNGFSGSYQPPYLRGGNRHESSEFPDYQYEQ
ANNQPYKSQDLGRNLKDISKEDWKKWDLPVFQKNFYKEHPQVAALSPEEVQSITERLEIR
MEGEDAPRPILTFEQVGGGFPQYVLTQIAQEGFVEPTPVQSIGWPIALSGRDGVCIAETG
SGKTLSFLLPAIVHVNAQPALRPGDGPIVLVLAPTRELAQQIQDVAYKFGRSSRLRSTCG
EREGEVDIFLSSWTGAVFGGAPKGPQAGSLRRGIDICVGTPGRLIDFLETGTTNLRRVTY
LVLDEADRMLDMGFEPQIRSIVSQIRPDRQTLMFTATWPTEVQAMAQDFLHPKHLVAYVG
SHGMQAVKTVLQYVEVLEEADKPPRLVRILSAFNKDMPDGKILIFSATKRTTDDLVFELR
RCGYRAFGIHGDKDQQERDWVLGQFKRGDCQILVATDVASRGLDVNDVLLVVNYDMPGQI
SDYVHRIGRTGRAGRSGTAYSFFTRNDAAIGTLGPALIKASKRRPERGRPGGSKLALPGS
SGREGGEANVSQPLRARSTLQGRTGARQVVRCAGRSRENVNGTMTIVIPRECL
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcgaaagttgtcatcaatgcatggggggttgtcatcgcccaatctctctgtctc
tacatcgcgctggctgaaacttccaacactaacggcttctctggttcatatcaacctccg
tatctacgtggaggcaataggcatgaaagctccgaatttccagactatcaatatgagcaa
gcgaacaatcagccatataagtcccaagatttaggcaggaatctgaaagacatctcaaag
gaggattggaagaaatgggaccttcccgtgttccagaagaacttctacaaggaacatccc
caagttgctgcattgagtccggaggaggttcaaagcatcacagagcgtctcgaaatcagg
atggagggggaggatgcaccacggcctatcttgaccttcgagcaagtagggggggggttc
ccacagtatgtgttgactcagatagcacaagaaggcttcgtagagcccacaccagttcag
tcgatcggatggccgattgcattgtccggcagggatggtgtctgcattgctgaaacagga
tctggaaagactctctcttttttgcttccagcaatcgtacacgttaacgcacagccggcc
ctgcgaccaggggatggacccattgtactcgtcttggctcccacgcgcgagttggctcaa
cagatccaggatgttgcttacaagtttggaaggagctcgaggcttcggagtacttgcggt
gaaagagagggggaagttgatatctttctctcatcatggactggagcagtgtttggagga
gcgccgaagggaccgcaggcagggtcgctgagacgaggaatcgacatctgtgttggaacc
cctgggcgcctcatagatttccttgaaaccggaacgacaaatctgagacgggtaacatac
cttgtcttggatgaagcagacaggatgttggatatgggattcgagcctcagatccgctcc
atcgtcagtcagatccggcccgaccggcagactctgatgttcacagcgacatggccaact
gaagtgcaggcaatggcgcaagattttttgcatccaaagcacctcgttgcttacgtcggc
agtcatggcatgcaagctgtcaagacagttttacaatacgtcgaggtgctggaggaggcg
gacaagcctccccgacttgtcaggatcctttcggccttcaataaggatatgcccgatgga
aaaatccttatattctctgcaacaaaaaggacaacagacgacctcgtcttcgaactccgt
cgctgcggttatcgagcctttggaattcatggagacaaggatcagcaggagcgagattgg
gttttaggacagttcaaacggggggactgccagattctcgtagcgactgatgtcgcctcg
agagggctggacgtgaacgacgtcttgctggtcgtcaactatgatatgccggggcagata
tccgactacgtccaccgcattggaaggacaggacgagctggtcggagcgggactgcctac
tcgttcttcacgcggaatgacgcggctattgggaccttgggtccagcgctcatcaaggcg
agcaagagacgtcctgaaagaggccgaccaggaggttccaaactcgctctaccaggttct
tcaggacgcgaaggaggagaagcaaatgtctcgcagccccttcgtgcgcggtcgaccctt
caggggaggacgggggcgaggcaggtggtgagatgtgcggggcgaagcagagaaaatgta
aacggaacgatgacgatagtcattcctcgagaatgtttatga
DBGET
integrated database retrieval system
