Guillardia theta: GUITHDRAFT_164635
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Entry
GUITHDRAFT_164635 CDS
T02925
Name
(RefSeq) hypothetical protein
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
gtt
Guillardia theta
Pathway
gtt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gtt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GUITHDRAFT_164635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gtt03019
]
GUITHDRAFT_164635
Messenger RNA biogenesis [BR:
gtt03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
GUITHDRAFT_164635
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_14
2_5_RNA_ligase2
Motif
Other DBs
NCBI-GeneID:
17297155
NCBI-ProteinID:
XP_005827553
JGI:
Guith1_164635
UniProt:
L1IWC9
LinkDB
All DBs
Position
Unknown
AA seq
704 aa
AA seq
DB search
MADPDRDVTPIAELDNVRATKSSDFKVLHNMEVCLGYKNSFANPKELLAKLQSLKADVDL
KRNEGGENEDFAFDDVDTAMLNCNIAVLALQLRKYATATEALDRLFRNIEPLDELLAARI
CMMLLDSLSVQRLPEKAAQVLNFLEKTILALFASKASVDPSNSSQDSNTASSKTDGLGEF
QKYGFVSLPQLKILLSIYKAKHYLFHGNAKAAKREIKAAIAGSQPAELASPLMLKAHLEY
LRGNFRKAQKLLCSSSLSDQPFRAFQLNNMGCLHYRSRKYGIAAMYFRRSIQELSKGNEQ
TERSKMEAICCVKREEVLYNLGLQNLLLGRPEAAFSCLREASRLLYNRPRLWIRLSECCI
ARHHICTRQSDSRQSSDLIKSVSGKGSRRRVLVPIGLASLRSRCLQCGPPDGSAKDENGE
QGPGNGNDTAQPSNEHSTATGIEGQMTMSYALQCLQNAFFLISREAPAMFGSSWGSAGSQ
QAGNPSASNDDVDGDHSNGNGSSSAGKDTDEQQAGVTNREHSVNERWTLRQAILCKMAYV
HLCLDNPLMSLKAVNELLANESQCRPEYSYSARMYGTEALCLLEKSEEAVNMLEPLIQKD
LFAADVISGCGHGQSPARRCGLSHMSEASGMVETAAARSALHINLAAICVMQEKLNEAHQ
HVRIALNESPTCPAGLMIAVYLEIRKGNTAAALNILKHQRLMAS
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atggcggatcctgaccgtgacgtgacacccattgcagagttggacaatgtaagagccacg
aaatcgtcagacttcaaggtgttacacaacatggaagtttgcctgggatacaagaattcc
tttgccaatcccaaggaactccttgcaaaacttcagtcgctcaaggccgacgtcgacctg
aaacgaaacgaaggcggcgagaatgaagactttgcttttgatgatgttgatacagccatg
ctcaactgcaacattgctgtccttgcgcttcaactaagaaaatacgccactgcaacggaa
gctctggacaggctcttcaggaacattgaacctctggatgaactccttgccgcgagaatc
tgtatgatgcttcttgattctctgtctgtacagagactgcccgagaaggctgctcaggtc
ttgaactttctggaaaagaccatcctagctctgtttgcttcaaaagcaagtgtcgacccc
tcaaacagttcccaagattcgaacaccgcaagctccaaaacagatggccttggagaattt
cagaagtatggttttgtctctcttcctcagcttaagatcttgctgtctatctacaaagca
aaacattacctcttccatggcaacgcgaaagcagccaagagggagatcaaggctgccatt
gcggggagccagcctgctgagttggcatcgcctctgatgttaaaagctcatttggagtat
ttgaggggaaacttcagaaaggcacagaagctcttgtgctcaagctctctgagcgatcag
cctttccgagcttttcaactaaacaacatgggctgtctacattatcgctccagaaagtat
ggtattgcagcaatgtacttccgtagatcgatacaggagctgtccaaaggcaatgaacag
actgagaggtccaagatggaggcaatctgctgtgtcaaacgtgaggaagttctgtataac
ctaggccttcaaaatcttcttttgggaagaccggaagccgcattctcttgtttgagagaa
gcttcccgtttgctgtacaatcgtccaagactatggatccgtctgtcagagtgctgcatc
gcccgccatcatatctgcacccgccagagtgactcccggcagtcctccgacttgatcaaa
agtgtgagcgggaaaggctcaaggaggagggtccttgtccctatcgggctagcttccctc
cgcagtaggtgcctacagtgtggaccaccggacggttccgcgaaagacgaaaacggagag
caaggaccaggaaatggaaacgacacggctcaaccgtcgaacgagcattccactgcaacg
ggcattgaaggccagatgaccatgtcgtacgctctccagtgcctgcagaatgccttcttc
ttgatatcgcgagaagcgcccgcgatgtttgggagctcatggggatctgcgggatctcag
caggctggaaaccccagcgcctccaacgacgatgtcgatggcgaccattcgaacgggaac
gggtcgagctcggcggggaaagacacggacgagcagcaggctggtgtaacgaatcgggaa
cactcggtcaacgagaggtggaccctgagacaggctatcctgtgtaagatggcgtatgtt
cacctgtgcctcgacaatcctctcatgtcattgaaagcggtcaacgagctgctggcaaat
gagagccagtgccgaccagagtactcctactcggctcgcatgtacggcacagaagctctc
tgcttactggagaagtcggaagaagccgttaatatgctcgagccgctcatccagaaggac
ttgttcgcagccgacgtgatcagtggatgcggtcacggacagtcgccggcgcggcgatgc
ggcttgtcacacatgagcgaagcttcaggcatggtggaaacggcggctgctcgcagtgct
ctgcatatcaacctagcggccatctgcgtgatgcaggagaagctcaatgaggcccatcag
cacgtgcggattgcgctcaacgagtctcctacatgtcctgcaggcctcatgatagcagtg
tacctggagatccggaaaggcaacacggcagccgccttgaacattctcaagcaccaacga
ctcatggcctcttga
DBGET
integrated database retrieval system
