Guillardia theta: GUITHDRAFT_166652
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Entry
GUITHDRAFT_166652 CDS
T02925
Name
(RefSeq) hypothetical protein
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
gtt
Guillardia theta
Pathway
gtt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gtt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
GUITHDRAFT_166652
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gtt03041
]
GUITHDRAFT_166652
Spliceosome [BR:
gtt03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
GUITHDRAFT_166652
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
WDR55
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_EML
Beta-prop_WDR75_1st
ANAPC4_WD40
PRP4
WDR90_beta-prop_4th
Beta-prop_EIPR1
NBCH_WD40
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_WDR75_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
Beta-prop_SPT8
eIF2A
WD_LRWD1
Nbas_N
Beta-prop_IFT140_1st
Beta-prop_IFT140_2nd
4HBT_3
Motif
Other DBs
NCBI-GeneID:
17289394
NCBI-ProteinID:
XP_005819657
JGI:
Guith1_166652
UniProt:
L1I992
LinkDB
All DBs
Position
Unknown
AA seq
479 aa
AA seq
DB search
MRARTVAAPTNDHDVKMQLRKFREPICLFGEGPAERRDRLKIILARKEVEEGISANDIVS
GAREDDDRDFRDGQVKETFYTEGPDELKTARLWIAEYSLPRAKSRTMIAKRKQAELETYI
AKKEAKLKEYETAIKEGREIPEEDIEDTRMDEDNETEQEHNRFMDKAGKYRNLDLSSSQI
GDARPISGCSFSPDGQFLATSSWSGVAKIWSMPSCDLKFTLYGHAERLTDAKFHPQFDSA
AVGNTEGKGKVVAAATSSADLKVKLWSNDSFRDIGTLEGHAGRVCRIGFHPSGRYLGTTS
FDKTWRMWDLETQQELLCQEGHSRALYNLAFQVDGALVASAGLDAICRVWDLRTGRSIMT
LQGHVKQILGLDFNPDGVKIATGSDDNTIKLWDLRKRKAYYTMPAHPNLVSAVKYSSCGD
FLISSSYDRTCKIWNLRNFTAIKTLSGHDEKVMCVDFAPAGDLVVSASYDRTFKVWSTE
NT seq
1442 nt
NT seq
+upstream
nt +downstream
nt
aaatgcgtgcgaggactgttgctgctcctacgaacgatcatgatgtcaagatgcaactca
gaaaatttcgggagcctatctgcttgtttggggaagggccagctgaacgtcgtgatcgtc
tcaagatcattcttgcaagaaaggaagtcgaagaaggaatatcagccaacgatattgttt
ctggtgctcgcgaagacgacgatcgagacttccgtgatggacaagtgaaggagactttct
atactgagggacctgacgagctgaaaactgctcggttgtggatagctgagtactcgctac
caagggcgaagagcagaacgatgatagcaaagaggaagcaggccgagctcgaaacttaca
tcgcgaaaaaagaggccaagttgaaggagtacgaaacggcgatcaaagaggggagagaaa
taccggaggaagacatcgaagatacccgcatggatgaggacaatgaaacagagcaggagc
acaacagattcatggacaaggctggaaagtatcgaaatctagatttgtcttcatcgcaga
ttggggatgctcgacctatatcgggatgtagcttcagtcctgatggacagtttcttgcga
caagttcgtggtcgggagtggcgaagatttggtcaatgccatcatgcgacttgaagttca
ccttatacgggcatgccgagcgattaacagacgcaaaatttcatcctcagttcgattcgg
cggcagtagggaacacggaaggaaagggaaaggttgtggcggctgcaaccagcagtgcag
acctcaaggtcaaactgtggagcaacgactcgttcagggacatcgggacgctggaggggc
atgcagggagagtctgtaggatcggcttccacccctccgggaggtacttggggacaacaa
gcttcgataagacttggagaatgtgggacttggagacgcagcaagagttgctgtgccagg
agggacattcgcgtgctctctacaatctcgcgttccaggttgatggagctctggtggctt
ctgccgggttggatgcgatctgcagagtctgggatcttcgaactggacggtcgatcatga
cgctgcagggacatgtcaagcagatcttgggacttgacttcaacccggacggcgtcaaga
tcgcgactggcagcgatgacaacaccatcaagctgtgggacctgaggaagcgaaaggcct
actacacgatgccggcccatccaaatcttgtgtctgctgtcaagtactccagctgtggag
atttcctcatctcctcctcctacgacaggacatgcaagatttggaacctccgaaacttca
cagcgatcaagactttgtcaggacacgacgagaaggtcatgtgcgttgacttcgcgccag
ctggagatcttgtggtcagcgcctcctacgatcgtaccttcaaggtgtggtcgacagagt
ga
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