KEGG   Guillardia theta: GUITHDRAFT_166652
Entry
GUITHDRAFT_166652 CDS       T02925                                 
Name
(RefSeq) hypothetical protein
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
gtt  Guillardia theta
Pathway
gtt03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:gtt00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    GUITHDRAFT_166652
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:gtt03041]
    GUITHDRAFT_166652
Spliceosome [BR:gtt03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    GUITHDRAFT_166652
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz EIF3I WDR55 Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_EML Beta-prop_WDR75_1st ANAPC4_WD40 PRP4 WDR90_beta-prop_4th Beta-prop_EIPR1 NBCH_WD40 Beta-prop_DCAF4 Beta-prop_SCAP Beta-prop_WDR75_2nd Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_IFT122_1st Beta-prop_SPT8 eIF2A WD_LRWD1 Nbas_N Beta-prop_IFT140_1st Beta-prop_IFT140_2nd 4HBT_3
Other DBs
NCBI-GeneID: 17289394
NCBI-ProteinID: XP_005819657
JGI: Guith1_166652
UniProt: L1I992
LinkDB
Position
Unknown
AA seq 479 aa
MRARTVAAPTNDHDVKMQLRKFREPICLFGEGPAERRDRLKIILARKEVEEGISANDIVS
GAREDDDRDFRDGQVKETFYTEGPDELKTARLWIAEYSLPRAKSRTMIAKRKQAELETYI
AKKEAKLKEYETAIKEGREIPEEDIEDTRMDEDNETEQEHNRFMDKAGKYRNLDLSSSQI
GDARPISGCSFSPDGQFLATSSWSGVAKIWSMPSCDLKFTLYGHAERLTDAKFHPQFDSA
AVGNTEGKGKVVAAATSSADLKVKLWSNDSFRDIGTLEGHAGRVCRIGFHPSGRYLGTTS
FDKTWRMWDLETQQELLCQEGHSRALYNLAFQVDGALVASAGLDAICRVWDLRTGRSIMT
LQGHVKQILGLDFNPDGVKIATGSDDNTIKLWDLRKRKAYYTMPAHPNLVSAVKYSSCGD
FLISSSYDRTCKIWNLRNFTAIKTLSGHDEKVMCVDFAPAGDLVVSASYDRTFKVWSTE
NT seq 1442 nt   +upstreamnt  +downstreamnt
aaatgcgtgcgaggactgttgctgctcctacgaacgatcatgatgtcaagatgcaactca
gaaaatttcgggagcctatctgcttgtttggggaagggccagctgaacgtcgtgatcgtc
tcaagatcattcttgcaagaaaggaagtcgaagaaggaatatcagccaacgatattgttt
ctggtgctcgcgaagacgacgatcgagacttccgtgatggacaagtgaaggagactttct
atactgagggacctgacgagctgaaaactgctcggttgtggatagctgagtactcgctac
caagggcgaagagcagaacgatgatagcaaagaggaagcaggccgagctcgaaacttaca
tcgcgaaaaaagaggccaagttgaaggagtacgaaacggcgatcaaagaggggagagaaa
taccggaggaagacatcgaagatacccgcatggatgaggacaatgaaacagagcaggagc
acaacagattcatggacaaggctggaaagtatcgaaatctagatttgtcttcatcgcaga
ttggggatgctcgacctatatcgggatgtagcttcagtcctgatggacagtttcttgcga
caagttcgtggtcgggagtggcgaagatttggtcaatgccatcatgcgacttgaagttca
ccttatacgggcatgccgagcgattaacagacgcaaaatttcatcctcagttcgattcgg
cggcagtagggaacacggaaggaaagggaaaggttgtggcggctgcaaccagcagtgcag
acctcaaggtcaaactgtggagcaacgactcgttcagggacatcgggacgctggaggggc
atgcagggagagtctgtaggatcggcttccacccctccgggaggtacttggggacaacaa
gcttcgataagacttggagaatgtgggacttggagacgcagcaagagttgctgtgccagg
agggacattcgcgtgctctctacaatctcgcgttccaggttgatggagctctggtggctt
ctgccgggttggatgcgatctgcagagtctgggatcttcgaactggacggtcgatcatga
cgctgcagggacatgtcaagcagatcttgggacttgacttcaacccggacggcgtcaaga
tcgcgactggcagcgatgacaacaccatcaagctgtgggacctgaggaagcgaaaggcct
actacacgatgccggcccatccaaatcttgtgtctgctgtcaagtactccagctgtggag
atttcctcatctcctcctcctacgacaggacatgcaagatttggaacctccgaaacttca
cagcgatcaagactttgtcaggacacgacgagaaggtcatgtgcgttgacttcgcgccag
ctggagatcttgtggtcagcgcctcctacgatcgtaccttcaaggtgtggtcgacagagt
ga

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