Guillardia theta: GUITHDRAFT_182930
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Entry
GUITHDRAFT_182930 CDS
T02925
Symbol
RpoTm
Name
(RefSeq) RNA polymerase, single subunit, mitochondrial
KO
K10908
DNA-directed RNA polymerase, mitochondrial [EC:
2.7.7.6
]
Organism
gtt
Guillardia theta
Brite
KEGG Orthology (KO) [BR:
gtt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
gtt03029
]
GUITHDRAFT_182930 (RpoTm)
Enzymes [BR:
gtt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GUITHDRAFT_182930 (RpoTm)
Mitochondrial biogenesis [BR:
gtt03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial RNA polymerase
GUITHDRAFT_182930 (RpoTm)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol
RPOL_N
Motif
Other DBs
NCBI-GeneID:
17311222
NCBI-ProteinID:
XP_005841654
JGI:
Guith1_182930
UniProt:
L1K266
LinkDB
All DBs
Position
Unknown
AA seq
1194 aa
AA seq
DB search
MSGKRIRLSQGSREKLHLASFWPLTCASKLQACLLTPGWLQRPCSRREYSDVRRHDPIAA
CSLGKQIKGGHCLITSRLCQLSRFNLISRSARVSRNQAGGASDPGQSEGSPSSDRDESRV
MNNQHASVDEMRPFRKSEIYPRIITTSKLLGETTISVDKPALVLVSLIHSILTKWIEVEQ
TMQSSVQDHKENADPRVLINSARLHSRFLDHNGGMPTDAFDDSTLSGLREKFEDSLLVHR
GKPGLEMHMPNPYTANELPPQFKKYSKNPLAIMQNVDEDRLPHFFEVLEENIKSSTLQEN
SSIHSAVKASTKLSKILENKAKMMLKHPQWGTADFAKQIFLEQRGYEIGMSIYRKGRAAT
EMRGKGGSMSAVENLLLTWLDDVQLAVRRHQEAYVSRTFKQGEFVRFLIESLCCSAVEDP
ALSPFKDVEMFNYNMEQSISKIQTLHESDDEGIGLIGPILMSLPASKIAVITIHELLSSL
LSGGGQVHFVRAARTVGEGIQAELGLEHVKKAKNRFLLSSRRLSALCKAHDVRKLNKLLS
RLESQPLWDARMQVKVGAKLIQILMNSAKYKGSAAVTHVVQAQMSNKGMRKKGFLALDQE
ILQDLEKQHDSVAAHNPLLLPMIIRPFPWMSFDVGCYIQARTKVMRIVDKGLQEESCRNH
DLSRIYAALDVLSGTGWCINRRLLNVVQHAWLDDMILGEIPQKDDFAVPELDPDCIDAAE
SYSQYREKKRVEQRNKDLHSLRCSLINQLHVATTMSDFKEFFFPHNLDFRGRAYPIPPHL
NHLGSDICRGLLKFSKKKPLGKKGFYWLKVHLANLFGENKISYDDRVKWTEERMSQILHS
AKNPLDSASRKFWLSADDPWQALATSMEIQEAIESGDPSTYLSNLPVHQDGSCNGLQHYA
ALGLDEIGGEQVNLVPGEKPSDPYTTVCNRVLEALDMDLRDPSSADHEVSKLVDKRVSRK
VVKQTVMTTVYGVTFIGAREQIYNRLYEAYGIPGTNELQENDLYRASMYLAKLTLASVGN
IFVGARKTMEWLTSVAKIVASTGQPVRWTTPLGLPVVQPYYKETMMSVETAVQNISLLKC
DENGPINKLKQRTAFPPNFVHSLDSTHLLMTAIEFDRRGKTFAGVHDSFWTHACDYEELA
LVLREQFVHLYTQPILNDLKNSFERDYPTIGRLPVPLKGRLDINVVKQSPYFFS
NT seq
3585 nt
NT seq
+upstream
nt +downstream
nt
atgagtggaaagcggataagactttcgcaaggatcgcgcgaaaaactccacttggcgtct
ttctggcctttaacatgtgctagcaagttgcaggcatgtttgcttacaccaggatggctc
cagcgaccatgttcacgtcgggaatattcggacgttaggaggcacgatccgattgctgct
tgcagtttgggcaagcagatcaaaggcggacactgtttgatcacgtcgagactgtgtcag
ctctcaaggttcaacttgatttccagatctgctcgggtttcaaggaaccaggccggaggt
gcgagcgatccagggcagagcgaagggagcccttcctctgaccgagatgaatctcgagtg
atgaacaaccaacatgcaagtgttgatgaaatgcgccccttcagaaagagtgagatttat
ccgcgaatcatcaccactagtaagttgttgggagagacaactatatctgtggacaaacca
gcgttggttctggtctctcttatacattccattctgaccaagtggattgaagtggaacaa
acaatgcaatcaagcgtgcaggaccataaagaaaatgcagatccacgtgttttgatcaat
tcagcacggttgcattccagattcttggatcataacggtgggatgccaacagatgcgttc
gatgattcgactttatcgggtctccgcgagaagttcgaagatagcttgcttgttcacaga
gggaaaccaggcttggagatgcacatgcccaacccttacactgcgaatgaacttccaccc
cagttcaagaagtattcgaaaaaccccctggctatcatgcaaaatgttgatgaagatagg
cttcctcattttttcgaagtattggaggagaatatcaagtctagcacattgcaagaaaat
tcctcgatccactcggctgtaaaagcttcaaccaagttgtcaaaaattttggaaaacaag
gcgaaaatgatgttaaaacatccccagtggggaactgcagattttgcaaaacaaattttc
ctggaacagaggggttatgagattggaatgtcaatatacaggaaagggcgagctgcaacg
gagatgagagggaaaggaggctctatgtcagctgttgaaaacctcttattaacttggctg
gacgatgttcagttggcagtacgacgccaccaagaggcttacgtttcaagaactttcaaa
cagggtgaattcgtgcgatttttgattgagtccctttgttgttcagctgtcgaagatcca
gccttgagtcctttcaaagatgttgaaatgttcaactacaatatggagcaatcaatcagc
aaaatccaaaccctgcatgaatcagacgatgagggaattggattgattggcccaattttg
atgagtttgccagcaagtaagattgctgtcatcacaattcatgaactcctgtcttcattg
ctttcgggaggtggacaagttcattttgtacgcgctgctagaaccgtcggagaaggaatt
caggccgaactcggcttagagcacgtcaagaaagctaagaatcgatttctcctcagctct
cgaaggctgagcgctctttgtaaagcgcacgatgttcgcaagttaaacaaactcctctca
cggttggagagccagccgctatgggatgcgagaatgcaagtgaaggtgggcgccaaactc
attcaaatactgatgaacagtgcaaagtacaaaggttcagctgctgtcacgcatgttgtg
caagcacaaatgtcaaataaaggtatgaggaagaaggggttcttggccctagaccaggaa
atcttgcaagatttggagaaacaacatgattctgttgctgcgcacaatccgctgcttctt
cctatgatcatccgtccgtttccatggatgtcgtttgatgttggctgctatattcaagcg
cggacaaaggttatgaggattgttgacaaaggattgcaagaagaatcatgccgcaatcat
gatctctctagaatttatgctgcgctcgacgtcctttcaggcactggctggtgcattaat
cgtcgtttacttaacgtcgtccaacatgcatggttggacgatatgattttgggtgagatt
ccgcagaaagatgacttcgccgtccctgagctggatccggactgcattgatgctgccgag
tcctactcacaatacagagaaaagaagagggtagagcaaagaaacaaggatctacactcc
ctccgctgctctctgatcaatcagttgcatgttgccaccactatgtcagatttcaaggag
ttcttcttcccacacaatctagacttccgtgggcgagcgtatccgattccgcctcacttg
aaccacctgggaagcgacatctgcagagggctgctcaagttttccaagaagaagccattg
ggaaagaaaggattctactggttgaaagttcacttggcgaatttatttggagaaaacaag
atcagctacgatgatcgagtcaagtggacagaggagcgaatgagtcagatccttcactca
gctaagaatcctctggatagtgcttcaaggaagttctggttatctgcagatgatccatgg
caggctcttgctaccagcatggagatccaggaagccatcgaatctggagacccgtcaacc
tacctgagcaatcttccagtccatcaagacggaagttgtaatggattacagcattatgct
gcgttgggattggacgagataggaggggagcaggtcaatctcgtacctggtgagaagcct
tcggatccttacacgacggtttgcaatcgcgtgctggaagcgctcgatatggacttgcgt
gatccttcctctgcagaccacgaggtgtcgaagttagtagacaagagggtctcgaggaaa
gtcgtgaagcagaccgttatgacaaccgtttacggcgtgactttcattggagcaagagag
caaatctacaacaggctgtatgaggcttatggaattcctgggactaatgagctccaagag
aacgacctctatcgcgcttccatgtacctggcaaagctcacgctagctagtgttggaaac
atcttcgtcggtgccagaaagacgatggaatggctcacgtctgtcgctaagattgttgca
tcaactggccagcctgttcgctggacgacgcctttgggtttgcccgttgtccagccttac
tacaaggagaccatgatgtcagtggagactgctgtgcagaacattagtctgctgaagtgt
gatgagaacggacccatcaacaagttgaagcagcggactgcattccctcccaacttcgtc
cactccctcgactccacgcacctcctcatgactgcgatcgagttcgatcggcgcgggaag
acgtttgcaggtgtgcatgacagtttctggacgcatgcttgcgactacgaggagcttgcg
ctagtgctgagagagcagtttgttcacctgtacacccagcccatcctcaatgatctcaag
aacagtttcgagcgggattaccccaccatcggacgcttgccggtacctcttaaagggaga
ctggatatcaacgtggtgaagcaaagcccgtactttttcagctga
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integrated database retrieval system
