Guillardia theta: GUITHDRAFT_40423
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Entry
GUITHDRAFT_40423 CDS
T02925
Name
(RefSeq) hypothetical protein
KO
K14408
cleavage stimulation factor subunit 3
Organism
gtt
Guillardia theta
Pathway
gtt03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gtt00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
GUITHDRAFT_40423
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gtt03019
]
GUITHDRAFT_40423
Messenger RNA biogenesis [BR:
gtt03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
GUITHDRAFT_40423
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
HAT_Syf1_CNRKL1_C
TPR_17
TPR_2
TPR_19
NRDE-2
UTP6_C
Motif
Other DBs
NCBI-GeneID:
17304600
NCBI-ProteinID:
XP_005834796
JGI:
Guith1_40423
UniProt:
L1JH56
LinkDB
All DBs
Position
Unknown
AA seq
482 aa
AA seq
DB search
IYERLLEVFPTSGRHWLAYANQYVADNDKKKAIEVLKRGLPHCPHVDLWRSYLTHFTSVT
MQSTKDNSEVLKAFERAVDAVGQDISSNSLWSEYIAFLRSCKVSNQYENTQRMNQLRRAY
HRCLQVPMHSVDKLWTEYEQWEKTLDPNNLQMAEQIIRDLEPKHKAARVAYKERKKLRDA
VQNPQFPGPYTGENKEKQNLKAWQELISFERSNPQKMPSEDLRKRVAFTFNQCLSYLPLY
PEIWYEAGNWHGEIGDLSGEIKTLEKGILMIPNSLLLHFALAEKHEMRGNITEAKNVYEN
LCELQPSPLVFIHYMRFARRSESVQAARTIFKKARKSAQGCSWHVYCDAALREYYSNKDA
QVARNIFEMGLKHYSCEVEFVLQYLDFLASFNDDNNTRVVFEKVLADENSLDRQQALLIW
DRFVDFEYSRGDLSAIHKLEQRRAMIYPERQGSQSLAQLACRFRFSNLWPCSSIERDLLG
IQ
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atttacgaaagactgcttgaggtctttccaacttctggtaggcattggcttgcttatgca
aaccagtatgtggctgacaatgacaaaaagaaagcgatagaagtactgaaacgtggtctt
ccacactgtcctcatgtggacctctggcgatcgtaccttactcattttacatcggtcacc
atgcagtcgaccaaagacaattctgaagttctaaaggcatttgaaagagccgttgacgct
gtcggccaagatatttcatcgaactcattatggagcgagtacatcgcattcttacgcagc
tgtaaggtgtcgaaccaatatgaaaatactcaacggatgaatcagcttcgaagagcatac
catcgatgtttgcaagtaccgatgcattctgtggacaagttatggacggaatatgaacag
tgggaaaagacattggatccaaacaatttgcagatggcggagcaaattattcgtgatctc
gaacccaagcataaagcagcaagagtggcatacaaggagaggaagaagctgagggatgca
gttcagaatcctcagtttcctggtccgtacacaggcgaaaataaggagaaacaaaatctc
aaagcctggcaagagcttatctcttttgagcgttcgaatcctcagaagatgccttcggaa
gacctcaggaaacgagttgcgttcaccttcaatcagtgtttgtcgtatttacctctatat
ccagaaatctggtacgaagcgggaaactggcatggagagatcggagacttgagtggagaa
ataaaaacgttggagaaggggattttgatgattccgaacagtttgttgcttcatttcgct
ttggcagaaaaacatgaaatgcgtggcaacattacagaggctaaaaatgtatatgaaaac
ttgtgtgaattgcaaccttccccgctggtttttattcactacatgagatttgctcgacgg
tcggaaagtgttcaggcagctcgcaccatcttcaagaaggcacgcaagagtgcgcaggga
tgtagctggcatgtgtactgcgatgcagcacttagagagtactactcgaacaaggatgct
caggtcgctcggaatatttttgaaatgggactcaaacactattcatgcgaagttgaattt
gtgttgcagtatttggatttcttggcttctttcaatgacgacaacaatacaagggttgtt
tttgagaaagtgcttgccgatgagaacagtcttgatcgccagcaagcgcttttgatatgg
gaccgcttcgtggattttgagtattctcgaggcgacttgtcagcgatacacaagttggag
cagagacgggctatgatttatccagagagacaaggcagccaaagtcttgcgcagcttgcg
tgcaggtttcgcttttcgaacctttggccgtgtagctctatcgaaagagatcttttggga
attcag
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integrated database retrieval system