Guillardia theta: GUITHDRAFT_40761
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Entry
GUITHDRAFT_40761 CDS
T02925
Name
(RefSeq) hypothetical protein
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
gtt
Guillardia theta
Pathway
gtt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gtt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GUITHDRAFT_40761
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gtt03019
]
GUITHDRAFT_40761
03012 Translation factors [BR:
gtt03012
]
GUITHDRAFT_40761
Enzymes [BR:
gtt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
GUITHDRAFT_40761
Messenger RNA biogenesis [BR:
gtt03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
GUITHDRAFT_40761
Translation factors [BR:
gtt03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
GUITHDRAFT_40761
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
DEAD
HA2_C
AAA_19
AAA_16
HA2_N
ResIII
nSTAND3
AAA_22
AAA
AAA_23
Motif
Other DBs
NCBI-GeneID:
17296660
NCBI-ProteinID:
XP_005826952
JGI:
Guith1_40761
UniProt:
L1IV46
LinkDB
All DBs
Position
Unknown
AA seq
645 aa
AA seq
DB search
RQQLPGFKMKETCVSTILQNRVTIISGDTGCGKTTQVPQAVFDHYVSMGMGGTCHCVVTQ
PRRVSAMSVAERVAAERVEILGTTVGYQIRQESVLPRSCGSLLFCTTGVLIRRLTKFIRT
GAQEIPNISIIFVDEVHERDVNSDFLLIMLKKILQHNSSIRIVLMSATINAEKFSQFFDS
CPIVTIPGRTFDVTEQFLEDYVTIIARPVASSSSSFGNKLMRSDSWRREKLERNRTRARS
TFEYSEAVRQLRHKGLDEDELAAVASMSDVNFIDYDMLTELILHIDQDPRRGSILCFLPG
WEEILSAHEMLLSHPFVVRNPRFVVLRLHSNISPQEQQEVFRPVADDKRKIVLSTNIAET
SITLDDCVFVIDSGRAKRMTYDPHTQISSLGVTWASKANVKQRKGRAGRVCEGVCYRLFT
RSQFAGMQDEMDPDMTVVPLDQICLSTLALQIGNCQEVLSQALDPPPLSQIEVALKSLRG
LGATDEQQKLLPLGQKLCQMHMEPRLAKMLLFSTVFRCLRPMLAVVCGREFKDPFISDPR
TEEARLRVAGRCCSDQLLTAEILNLFESASDRSSAEAYDFCNRNLLSYNLLNQMKGFQTK
VLDMVCKRGYRPPLQPFLMDSSTWDRHGELVRAVICSGLLPNVAR
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
aggcaacagctgcccggtttcaagatgaaggagacgtgcgtcagcaccatcctgcagaac
agagtgactatcatcagcggggacacgggctgcggcaagacgacgcaagtgccgcaggcg
gtgttcgatcactatgtgagcatggggatgggtggaacctgtcactgtgtggtgacccag
ccacgtcgagtctcggccatgtcagttgcagagcgagtggcagcagagcgagtggaaatc
cttgggacgaccgtcggctaccagatccgacaggagtccgtgctcccgcggtcctgcggc
agcctgctcttctgcacgaccggcgtgctgatccggcgcctgaccaagttcatccggact
ggcgcccaggagatccccaacatctcgatcatcttcgtggacgaggtgcacgagagggac
gtgaacagcgacttcctgctcatcatgctcaagaagatcctgcagcacaactcctccatc
cgcatcgtcctcatgtccgccaccatcaacgcggagaagttcagccagttcttcgactcc
tgccccatcgtcaccatccccgggaggaccttcgacgtgaccgagcagttccttgaagac
tacgtcaccatcatcgcccgcccagtcgcctcctcctcctcctccttcggcaacaagctc
atgcgcagcgactcgtggaggagggagaagctagagaggaacaggacacgagcaaggtcc
acgttcgagtatagcgaggcggtacggcagctgcggcacaaggggctggatgaggacgag
cttgctgcggtagcctcgatgtcggacgtgaacttcatcgactacgacatgctcaccgaa
ctcatcctgcacattgaccaggacccccgcaggggatcgatcctctgcttccttcccggc
tgggaggagattctttccgcgcacgagatgctcctgtcgcatcccttcgtcgtcaggaac
cctcgcttcgtcgtcctcaggctgcactccaacatctccccgcaggagcagcaggaagtc
ttccggcctgtcgccgacgacaagaggaagatagtgttgtcgaccaacatcgctgagacc
tccatcaccctcgacgactgcgtcttcgtcatcgactccggcagggccaagcggatgacc
tacgatccgcacactcaaatctcctcgctcggagtcacctgggcctccaaggccaacgtg
aagcagaggaagggtcgagctgggcgcgtgtgcgagggcgtatgctaccgtctcttcact
cgcagccagttcgcggggatgcaggatgagatggacccggacatgacggtcgttcctctc
gaccagatctgcctgagcacacttgctctccagatcggaaactgccaggaggttctgtcc
caggctctggatcctcctcccctgtcgcagatcgaagttgcgctcaagtcgctccgaggg
ctcggggcgaccgacgagcagcagaaacttcttcccctgggccagaagctctgccagatg
cacatggagccgaggcttgcaaagatgcttctcttttctaccgtgttccgctgcctgagg
ccgatgctggcggtcgtgtgtgggagggaattcaaagatcccttcatctccgaccccagg
acggaggaggcgaggctgagagtagcgggaaggtgctgcagcgatcagctgctgacggcg
gagatcttgaacttgttcgagtccgcgagcgacaggagcagcgccgaggcctacgacttc
tgcaacaggaacttgctgagctacaatctgctgaaccagatgaagggcttccagactaag
gtcttggacatggtctgtaagaggggctacaggcctcccctccagcccttcctcatggac
tcgagcacgtgggatcggcatggcgagctggtcagagccgtgatctgctccgggctcctg
cccaacgtcgcgagg
DBGET
integrated database retrieval system
