Guillardia theta: GUITHDRAFT_56212
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Entry
GUITHDRAFT_56212 CDS
T02925
Name
(RefSeq) hypothetical protein
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
gtt
Guillardia theta
Pathway
gtt03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
gtt00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
GUITHDRAFT_56212
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gtt03021
]
GUITHDRAFT_56212
03036 Chromosome and associated proteins [BR:
gtt03036
]
GUITHDRAFT_56212
Transcription machinery [BR:
gtt03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
GUITHDRAFT_56212
Chromosome and associated proteins [BR:
gtt03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
GUITHDRAFT_56212
RSF complex
GUITHDRAFT_56212
WICH complex
GUITHDRAFT_56212
B-WICH complex
GUITHDRAFT_56212
NORC complex
GUITHDRAFT_56212
BRF complex
GUITHDRAFT_56212
NuRF complex (fruit fly)
GUITHDRAFT_56212
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
DEAD
HDA2-3
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
17299595
NCBI-ProteinID:
XP_005829947
JGI:
Guith1_56212
UniProt:
L1J3S1
LinkDB
All DBs
Position
Unknown
AA seq
471 aa
AA seq
DB search
QKQPASIVGLSLFPYQLEGLQWLVRMNDNGVGMILGDEMGLGKTIQTISLLAVLAERKET
KGTHLVVCPLSVLGTWESEFRRWCPSLNVRVLHGAKPCRDKVLEGLRNEEGGTCDVMITT
YEMMVAEGRRFALYHYLILDEAHKIKNDNSLAFHAVSNIRSVNKILLTGTPLQNNMHELW
VLVNFLFPDLFADAELFDAAFSSTWEGVKFDFELMRAAHKLLQPLMLRRLKKDVQQALPK
KTVYTIWCPLTSMQKFWYKQFLLLNQGSIAHLKDARISSSSMQSLMNLLMQLRKVCCHPY
LFPDAETDPTSTDANIVTNSTKMMVLHRLIDKLHAQGRKLLVYSQFTRMLDVIQDYCELV
GHKYLRLDGSTASCRRKYEIQLFNSGKSHAYVYLLSTRSGALGITLTGADTVVMMDSDWN
PTWDKQAQDRVHRIGQKREVTIYQLLAANTVEERIFQRAQQKVALNQIVLQ
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
cagaagcagccggcaagcattgttggacttagtttgttcccataccagctggaaggactg
caatggcttgtcaggatgaacgacaacggggttggtatgatcttaggagacgagatggga
ctgggaaagaccatccagacaatctcactgctcgcagtgctcgcagagaggaaggagacc
aaggggacgcatctcgtagtttgtcctctctctgtgctggggacctgggaaagtgagttc
cgtcgttggtgcccctcgctcaacgtccgggtcctgcacggagcgaaaccgtgccgggac
aaggtgttagaaggcctcaggaatgaggagggaggaacgtgcgacgtcatgatcacaact
tatgagatgatggtagcggaaggcagaaggttcgcgttgtatcactacttgatcctggat
gaagcccacaagatcaagaacgacaattcgctcgccttccatgctgtcagcaacattcga
tccgtcaacaagattcttctgaccgggacgcccctccagaacaacatgcacgagctgtgg
gtcctcgtcaacttcttgtttcccgacctcttcgcagacgcagagctcttcgatgctgct
ttctccagcacgtgggagggcgtcaagttcgacttcgagctcatgcgagccgcacacaag
ctgctgcagccgctcatgttgaggagattgaagaaggatgttcagcaggccctgccgaag
aagacggtctacaccatctggtgccccctgaccagcatgcagaagttctggtacaagcag
ttcctcctcttgaaccaaggctccatcgcgcacctcaaggatgctcgaatcagctccagc
agcatgcagagcttgatgaacctgctgatgcagctcaggaaggtctgctgccatccctac
ctcttccccgacgccgagacagacccgacgagcacggacgcgaacatcgtcaccaactct
accaagatgatggtcctccaccgcctcatcgacaagctgcacgctcaaggccgcaagctc
ctggtctactcgcagttcactcgcatgctcgatgtcatccaggactactgcgaactggtg
ggccacaagtacctcaggctcgacggaagcaccgcgtcttgcaggaggaagtacgagatc
cagctcttcaacagcggcaagtcgcacgcctacgtctacctcctctccacgcgctctggg
gctctcggcatcaccttaacaggagcagatactgtggtgatgatggactctgactggaac
ccgacctgggacaagcaggcgcaggatcgggtgcatcggatcgggcagaagagggaggtt
acgatctaccagctgctagccgcgaacacggttgaagagcggatctttcaacgtgctcag
cagaaggtggcgctaaatcagatcgtgctgcaa
DBGET
integrated database retrieval system
