Guillardia theta: GUITHDRAFT_68305
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Entry
GUITHDRAFT_68305 CDS
T02925
Name
(RefSeq) hypothetical protein
KO
K12830
splicing factor 3B subunit 3
Organism
gtt
Guillardia theta
Pathway
gtt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gtt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
GUITHDRAFT_68305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gtt03021
]
GUITHDRAFT_68305
03041 Spliceosome [BR:
gtt03041
]
GUITHDRAFT_68305
03036 Chromosome and associated proteins [BR:
gtt03036
]
GUITHDRAFT_68305
Transcription machinery [BR:
gtt03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
GUITHDRAFT_68305
Spliceosome [BR:
gtt03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
GUITHDRAFT_68305
Complex B
GUITHDRAFT_68305
Complex C
U2 SnRNP specific factors
GUITHDRAFT_68305
Chromosome and associated proteins [BR:
gtt03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
GUITHDRAFT_68305
TFTC complex
GUITHDRAFT_68305
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
WDR55
Ant_C
Motif
Other DBs
NCBI-GeneID:
17305723
NCBI-ProteinID:
XP_005836006
JGI:
Guith1_68305
UniProt:
L1JKJ8
LinkDB
All DBs
Position
Unknown
AA seq
1202 aa
AA seq
DB search
MFLYALTLQRSGAITCTAYGNFSAPKQHEIVISHGKTLELIRPDQNGKIQSICQMECFGL
IRSMASFRLPGSNKDYLVLGADSGRISVLEFSKERNQFERVHLETYGKSGCRRIVPGQFL
ASDPKGRAVMISAIEKQKLVYVFNRDASSKLTISSPLEAHKASTIHFSIVGVDVGFDNPI
FAALEMDYSDADADETGQSAEEFNKVLTFYELDLGLNHVVRKASEPIDAASNMLIPVPGD
TDGPSGVLVCAENKIAYKKPDHEDVVALIPRRQGMPLDQPLLITGYSHLKQKDGFFFLLQ
SEIGDLYRLTLTYNDEEVSEINITYFDTVPVAQSITILKTGFLFVASEFGNHALYQFLSI
KGSDESDMMPVEVEIEGETIEIPHFAPRPLKNLLLVDEMESLSPILDMRVLDLAGEETPQ
IYALCGKGPRSTLRTLRHGLAVAEMAVSELPSNPLAVWTVKGSSKDAADKYIVVTFANAT
IVLSIGDTVEEVTDSGFLATNKTLSVSLLGDDSLLQVHPNGLRTVRSDKRISQFTPPNKG
VINLVAVNQQQVVVALADHTMIYFELDAVGQLQEKAKPEIGGGQIAALDISPLGAGRSRG
RFLAVGASVDGSWFVRILSLDPGSFMHIVSRQALPAKPESLCLIEISIGAAQSDGGTPTL
FLFAGLENGVLMRITVDPITGQLAPEFRTRFLGTKPVKLFKVLVQEQPAVLALSSRSWLA
YNFQGRYQITPLSYETLEYASGFASDQCPEGFVCVAANTLRILTVERLGEVFNQHSMKLS
FTPRKSALLKDSGCFVVLETDHNSDMEKAKEARCDVAEDEEEENENKLPHSIYGEQRAGE
AKWASRVRVIDPNERETKQIIELDPNEAALSVCVATFYDRKGHTFLCFGTAVGHKVGSRT
GSGFLHTYSVVGSQLTFVHKTPIDGVPRALCSFQGRLLVGVGSALRLYEMGKRKLLRKCE
NRNIPNLVVTISTMGDRIYVGDVAESISFLKYNRILNELVIFADDTHPRWMTAACPVDYD
TVAGADKFGNIFLTRLPDNVSDEISEEPGAVGMFEGNDLQGAHYKAEEIVQYHVGETVCS
LQKATLSPGGSDAIIYGTMYGGIGALQPFVSREDVDFFLHLEMHLRGAAGAREHKPAGEG
ICGRDQLSFRSYYFPVKDVVDGDLCETFNYLSPSRQKQIAEDLDRTPGEVAKKLEDMRNR
LL
NT seq
3609 nt
NT seq
+upstream
nt +downstream
nt
atgttcctctacgcccttactctccaacggtctggtgcgattacatgcactgcctacgga
aacttctcggctccgaagcagcatgaaatcgtgatttctcacgggaagacattggaactg
atcaggcccgatcagaatggaaagattcaatctatctgtcagatggaatgcttcggcttg
attcgctcaatggcttccttcagattgccgggttcaaacaaggattaccttgttttaggt
gcggattctggtagaatttctgttttagagttcagcaaagaaaggaatcaatttgagagg
gttcacttggagacttacggcaagagtgggtgtcgtcgcattgttccaggacaattcttg
gcgtcagatccgaagggacgtgcagttatgattagcgccattgaaaaacagaaacttgtg
tatgttttcaacagagatgcttcttcaaagctaaccatctcttcaccgctcgaagcccat
aaagcctctacaattcacttctctatcgttggtgttgacgtcggctttgacaaccccatt
ttcgctgcgctcgagatggattactcagatgcagatgcagatgagacgggccagtcagca
gaagaattcaacaaagttttgacattttatgagctcgacttgggtttgaaccatgttgtt
cgcaaagcgagcgaaccgatcgatgcggcctcgaacatgttgattcctgttccaggagat
acggatggacccagtggagtgcttgtttgtgctgagaataagattgcttacaaaaagccc
gatcatgaagatgttgttgccctgattcctcgacgccagggtatgccgttggatcaacca
cttctcatcacaggatattctcacttgaaacagaaggatggatttttctttctcttgcag
agcgaaattggcgatctctatcgtctgacgttgacttacaatgatgaggaagtatcggaa
atcaatatcacatacttcgacacggtgcctgttgcccaatcgatcactatcctcaagaca
ggattcttgtttgttgcttctgaattcggaaatcacgccctatatcaattcctgtccatc
aaaggaagcgatgaatcggacatgatgcctgtcgaagtcgaaattgaaggagagacgatt
gaaattccccactttgcgcctagacccttgaagaacctgctgcttgtggacgagatggag
tcattgtccccgattttggacatgagggttttggatcttgctggagaagagacaccgcaa
atctatgcgctctgtggaaaaggcccaagatcgactcttcgtaccctacgtcatggtctt
gcagtggctgaaatggctgtgtctgagttgccttctaatccgcttgctgtgtggactgtc
aagggcagcagcaaggatgcggcagataagtatattgtagtcacgtttgcaaacgcaacc
atcgttctctcgatcggagatactgttgaagaggtaaccgatagtgggttcttggcaacc
aacaagactttatcagtgtcgcttcttggcgatgactcgctacttcaagttcatcccaac
ggacttcgaactgtgcgctcggacaagcgtatcagccagttcaccccgccgaacaaaggc
gtcatcaacttggttgctgtgaaccaacaacaagttgttgtcgctcttgccgatcacacg
atgatttattttgaactggatgccgtcggccaattgcaggagaaggcaaagcctgagatc
ggaggaggacaaatagccgcactggacatctctcctctaggggccggacgcagcagagga
aggtttcttgcggttggagcttctgtggatggaagctggttcgtaagaatcctctcgctg
gatcctggaagtttcatgcacatagtttctcgtcaagccttgcctgccaaacccgagtca
ctctgtttgattgaaatttctattggagctgctcaatctgatggtggcacacctactctt
ttcctcttcgctggattggaaaatggtgttttgatgaggattacagttgatccaatcact
ggtcagctggcacccgagtttcgaactcgtttcctgggtacaaagcctgtcaaacttttc
aaagttttggtacaagagcagcctgccgtcctcgctttgtcttctcggtcttggttggcg
tacaacttccaaggtcggtatcagatcacgcccctgtcatatgagaccctggagtatgct
tctggttttgcctcggatcagtgtcctgagggttttgtttgcgttgctgccaacaccttg
agaatcttgacggttgaaaggcttggagaggtgttcaatcagcattcgatgaaactttcg
ttcacacctagaaaaagcgcactgctgaaggacagcggatgctttgttgtcctggagact
gatcataattctgatatggagaaggccaaagaagcgcgttgtgatgttgctgaggacgaa
gaagaagagaatgagaacaagctccctcactccatttacggagagcagcgtgctggagaa
gcaaagtgggcttcacgtgtacgtgtgattgatcccaatgagagggaaacaaagcaaatc
atcgaactcgatcccaacgaagctgcgctgagcgtgtgtgtagcaaccttctatgacagg
aaaggacatactttcttgtgcttcggaactgctgttggacacaaagttggcagccgaact
ggttcaggattcctgcacacgtattcagttgttggctcacagcttacctttgttcataag
actcccatcgatggcgttccgagagctttgtgcagctttcagggtcgcttgcttgtcggg
gtcggttcagctctgcgactctatgaaatgggaaagcgaaagttgttgcgaaaatgtgaa
aacagaaacatccccaaccttgtggtgacgatcagcaccatgggagacaggatctatgtc
ggagacgtcgcagagtccatctccttcctgaagtacaataggatactcaatgagcttgtc
atattcgccgatgacacccacccgcgatggatgacggcagcttgcccagtcgactatgat
actgttgctggagcagacaagttcggcaacatcttcctgaccaggcttcccgacaacgtg
tccgacgagatctctgaagagcctggggcagttgggatgttcgaggggaatgacctgcag
ggggcgcactacaaggcggaggagatcgtgcagtatcacgtgggagaaacagtatgtagc
ttacagaaggctaccctgtctcctggtggctccgatgctatcatctatgggacgatgtac
ggaggtatcggggctctccagccgttcgtgagccgcgaggacgtggatttcttcctccac
cttgagatgcaccttcgaggagccgccggagcaagggaacacaagccagcaggagaaggc
atctgtggaagggaccagctctccttccgctcctactacttccccgtcaaggacgtggtg
gacggcgacctctgcgagactttcaattacttgagcccgtcgcgacagaagcagatcgcg
gaggatctcgacagaacgccgggagaagtggccaagaagctcgaggatatgcggaacagg
ctgctctag
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integrated database retrieval system
