Guillardia theta: GUITHDRAFT_71483
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Entry
GUITHDRAFT_71483 CDS
T02925
Name
(RefSeq) hypothetical protein
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
gtt
Guillardia theta
Pathway
gtt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gtt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
GUITHDRAFT_71483
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gtt03041
]
GUITHDRAFT_71483
Enzymes [BR:
gtt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
GUITHDRAFT_71483
Spliceosome [BR:
gtt03041
]
Complex C
Other components
Step II factors
GUITHDRAFT_71483
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HA2_C
Helicase_C
OB_NTP_bind
HA2_N
Cas3-like_C_2
PRIMA1
Mito_fiss_reg
Motif
Other DBs
NCBI-GeneID:
17301945
NCBI-ProteinID:
XP_005832132
JGI:
Guith1_71483
UniProt:
L1J9Z7
LinkDB
All DBs
Position
Unknown
AA seq
496 aa
AA seq
DB search
MEAEKYSEYFNKCPVFTVPGRTFPVEVLYTKAPESDYLDAALITVMQIHLAEPPGDILLF
LTGQEEIDTACQILFERMKSLGKLAPKLNIFPVYSTLPSEMQTRIFDPTPIGERKVIVAT
NIAEASLTIDGIFYVVDPGFAKQKVFNPKTGVDALVVAPISQASAKQRAGRAGRTGPGKC
YRLYTENAFKSEMMPMSVPEIQRANLGNTVLQLKAMGINDIIHFDFMDPPPIQTLVHAME
TLYALGALDEEGLLTRLGRRMAEFPLDPTLSKILLAAVDLSCAEEILTIVAMLSVETLFY
RPKDKAAEADQKKSKFYCPEGDHLMLLNVYEAWKRNKFSNPWCYENFLHARSLRRAQDVR
KQILQIMDRHKLDIVSAGKNWNKVRKAIVSGFFHHAAKKDPQEVSFPPPPPPPPPSPFPF
PTPPLMVIYHELVTTTKEYMRNIIQIEAKWLVEVAPRYYRAGDPTKLSKRKRQEKIEPLY
NRFEEKDSWRLSKRRG
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgagaagtactccgagtacttcaataagtgccccgtcttcacggtccctggt
cgaaccttccccgtcgaggtcctgtacaccaaggcccccgagtctgactaccttgacgct
gcccttatcactgtcatgcaaattcaccttgcagaacctccaggtgacattctgctcttc
ctcacgggtcaggaggagattgacacggcctgccaaattctcttcgagcgcatgaagtcc
ctgggaaagctcgcccccaagctcaacatcttccccgtctactcgacgctccccagtgag
atgcagacaagaatcttcgatcccacccccatcggagagcgcaaggtcatcgttgccacc
aacatcgccgaggcctctctcaccatagacggcatcttctacgttgttgatcccggcttc
gccaagcagaaagtcttcaaccccaagactggagtcgacgccctcgtcgtcgcccccatc
tcacaggcctcggcaaagcagagggcagggcgagcaggcaggacggggccgggaaagtgc
taccgtctctacactgagaacgcgttcaagtcagagatgatgccgatgtctgtccctgag
atccagcgagccaacctcggcaataccgtcctacagctcaaggcaatgggtattaacgac
atcatacacttcgacttcatggatcctcctcctatccagaccctcgtccacgctatggag
actctatacgcccttggagccttagacgaggaagggctgctgacccgccttggaaggagg
atggcggagtttcccctggatccaacgctgtccaagatcctcctcgcagccgtcgacctc
tcctgcgccgaggagatcctgaccattgtcgccatgctctcggtggagacgctcttctac
cgccccaaggacaaggcggcggaggcagaccagaagaagtccaagttctactgcccggaa
ggagatcacctgatgctactcaatgtctacgaggcctggaagagaaacaagttcagtaac
ccctggtgctacgaaaacttcctgcacgctcgctcccttcgtcgagctcaggacgtgcgc
aagcagatcctgcagatcatggatcgtcacaagctcgacatcgtcagcgctggcaagaac
tggaacaaagtccgtaaagccatcgtcagcggcttcttccatcatgcagccaagaaggat
ccgcaggaggtatcctttcctcctcctcctcctcctcctcccccttcccccttccccttc
cccactcctccactcatggtcatttaccacgagctggtcaccaccaccaaagagtacatg
cgcaacatcattcagatcgaggccaagtggctggtcgaggtggcgccaagatactaccgg
gcgggcgaccccaccaagctttccaagaggaagaggcaagagaagatcgagccgctctac
aaccgctttgaggagaaggattcatggcgcttgagtaagaggagaggatga
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integrated database retrieval system
