Guillardia theta: GUITHDRAFT_75030
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Entry
GUITHDRAFT_75030 CDS
T02925
Name
(RefSeq) hypothetical protein
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
gtt
Guillardia theta
Pathway
gtt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gtt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
GUITHDRAFT_75030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gtt03019
]
GUITHDRAFT_75030
03041 Spliceosome [BR:
gtt03041
]
GUITHDRAFT_75030
Messenger RNA biogenesis [BR:
gtt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
GUITHDRAFT_75030
Spliceosome [BR:
gtt03041
]
Complex B
Other components
Prp19-related factors
GUITHDRAFT_75030
Complex C
GUITHDRAFT_75030
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Suf
TPR_8
TPR_12
TPR_2
ARM_TT21
TPR_CcmH_CycH
ARM_TT21_C
NRDE-2
TPR_15
PPR
Motif
Other DBs
NCBI-GeneID:
17297787
NCBI-ProteinID:
XP_005828114
JGI:
Guith1_75030
UniProt:
L1IZ03
LinkDB
All DBs
Position
Unknown
AA seq
852 aa
AA seq
DB search
MADSTEDVPSSLIPEGEAVVYEEELLANPFSVKLWLRYLQVRANAPFSQRKILYERALKA
LPGSYKLWNMYLTERKDRLRHKCVTDPAFDSLNNTYERALVFMHKMPRIWLEYTKFLQLQ
RKVTKTRHAYDRALRSLPITQHDKIWKQYIAFAKQSNVPEMAYRIFRRFMKLDPDSVEEY
VNYLAKHEQWNEAATLLAQALNRESFISKQGKSKHQLWLELCDMCTKHAQNITTLKVEPI
VRGALKRFTDDVGRLWTSLADYFIRLGHFEKARDIFEEGINTVITVRDFSMIFDAYTQFE
ETMISAKMQDDESENQQAEDDLDVEGDDLELRLARLQYLLDRRAELLCSVRLRQNPHNVH
EWHRRVKIFEEQDNPEKVIKAYAEAVQTVDPIKADGKPHTLWVSFAKYYEDNDDLDSARD
ILERASKVEFRSVEDLATVWCEWAEMELRHDEFEKAIKVLHKATYVSDRVARASVGKENP
NLSVQQRLWKSTKLWSMYADLEESLGTLESTKAVYERMIDLKVVTPQILINYAHMLEEAK
YFEESFKVYEKGVNAFEWPLSKELWVAYLSKFVKRYEGKKMERARDLFEQALSKIPERER
RAIFLMYAKFEEDFGLVKNTMSVYERACKEIAPEERYDLYIQYINKASEYFGITKTRPIY
EDAMQHVPDSRIKDVAVKYSELEQTLGEIDRARAIYQYGSQHCDPGKDEQLWKLWHAFEV
RHGNEDTFRDMLRIKRSVQLQFSQAHVNATDAAMALIEQVLLRLLLSCIADLSLGTGSEA
PPPHRPLPSPPTNSATTATTAPTNSATNSVPRQVPRDDDDDDDDDDDDDDDDDDDDDDDD
DGDDDDDDDDDE
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atggccgactcaactgaagacgtcccgagttcgctcatacctgagggagaagcggttgtg
tatgaggaggaacttcttgcgaatccattttcggtcaagctgtggctgcgttatctccag
gtgcgagctaatgcaccgttctctcagcgaaagattttgtatgaaagagccttgaaggca
ttgccagggagctacaaactgtggaatatgtatttgactgagcgaaaagatcgccttagg
cacaagtgtgtcactgaccctgcatttgattctctcaacaatacttatgagcgagcgttg
gtctttatgcacaagatgcctcgaatttggttggagtatactaagtttcttcaactccaa
aggaaagttacgaagacgagacatgcttatgatagggctctcagatctctgccgattaca
cagcatgataagatatggaagcaatatattgcgtttgcaaagcaatcaaatgttccagag
atggcttacagaattttccgacgatttatgaagttagatcccgactctgttgaagaatat
gtcaattacctggcaaaacatgagcaatggaatgaagctgcaacacttcttgcacaggca
ttgaacagggaaagtttcatttcaaagcaaggaaaatcaaaacaccaattatggcttgaa
ctatgcgatatgtgcactaagcatgctcaaaacatcaccacattgaaggtggaaccaatc
gtgcgaggtgccttgaaaagatttacagatgatgttggaaggttatggacatcccttgct
gattacttcattcgcctgggacactttgaaaaagcccgcgacatctttgaggaaggtatt
aacacagttattacagtgagagatttctcgatgatctttgatgcctatacacaattcgaa
gaaaccatgatatcggccaagatgcaggatgatgaatccgaaaatcaacaggccgaggat
gatttggacgtagaaggggacgacttggagttgaggttggctcggctgcagtatctgcta
gatcgacgagcagagcttctttgcagtgttcgactgaggcagaatccgcacaatgttcac
gaatggcatcgtagagtgaaaatattcgaagagcaagacaaccctgagaaggtgatcaag
gcttatgctgaagctgtgcagacggtagatcccatcaaggcagatgggaaaccccacacc
ctatgggtttcctttgccaagtactatgaagacaatgatgacttggactctgcaagagac
atcctcgagcgtgcgagcaaagttgagtttcgatccgtcgaggatcttgcaaccgtatgg
tgtgagtgggctgagatggagcttcgtcacgatgagtttgagaaggcgatcaaggtcttg
cacaaggcgacttatgtatcagatcgagtagccagggcttcggtgggaaaggaaaatcca
aatttgtccgtgcagcagagactttggaagagcactaaactgtggagtatgtatgcagat
ctggaggaatcccttggaaccttggaatcaaccaaggccgtgtatgaaagaatgattgat
ctcaaagttgtcacgcctcagattttgataaattatgcacatatgttagaggaggccaag
tatttcgaagaatctttcaaggtgtatgagaaaggggtcaatgcgtttgaatggccactt
tcaaaagaattgtgggttgcttatctctccaagtttgtcaagagatatgaaggcaagaag
atggagcgggctcgcgatctctttgagcaggccttgtccaagatccccgaaagagagcgc
agagccattttcctgatgtatgccaagttcgaggaagactttggtttggtgaagaacacc
atgtcggtctacgaacgggcctgcaaggagattgctccggaagagaggtacgatctttac
atccaatacatcaacaaggcttcggaatatttcggaatcaccaagactcgtccaatctac
gaggatgccatgcagcatgtaccggacagccgaatcaaagacgtggcagtcaaatactcc
gaactcgagcagactctcggggaaatcgatcgagcgagggcgatctaccagtacggctcg
cagcactgcgatcctggcaaagacgaacagctgtggaagttgtggcatgcctttgaagtt
cgacatggtaacgaagacaccttccgtgacatgctgcgcatcaagcgatcggttcaactt
cagttctcgcaagctcacgtcaacgcgacggacgcggcgatggcgctgattgagcaggtg
ctgctacgtctcctcctgtcctgcattgctgacctctccttagggaccggcagcgaagct
ccccctcctcatcgcccccttccctccccgcctacaaactctgctacaactgctacaaca
gctcctaccaactcagctaccaactctgtgcccaggcaggtgcccagggatgatgatgat
gatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgat
gatggtgatgatgatgatgatgatgatgatgatgagtga
DBGET
integrated database retrieval system
