Guillardia theta: GUITHDRAFT_81905
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Entry
GUITHDRAFT_81905 CDS
T02925
Name
(RefSeq) hypothetical protein
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
gtt
Guillardia theta
Pathway
gtt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gtt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
GUITHDRAFT_81905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gtt03041
]
GUITHDRAFT_81905
03009 Ribosome biogenesis [BR:
gtt03009
]
GUITHDRAFT_81905
Enzymes [BR:
gtt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
GUITHDRAFT_81905
Spliceosome [BR:
gtt03041
]
Complex A
U2 snRNP components
U2 related factors
GUITHDRAFT_81905
Complex B
GUITHDRAFT_81905
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
GUITHDRAFT_81905
Ribosome biogenesis [BR:
gtt03009
]
Eukaryotic type
90S particles
Helicases
GUITHDRAFT_81905
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_22
nSTAND3
AAA_19
ATPase
ABC_tran
SRP54
TsaE
TrwB_AAD_bind
PhoH
AAA_16
AAA_7
2C_adapt
AAA_30
DEAD
AAA_29
AAA_23
T2SSE
NB-ARC
AAA_24
TniB
RsgA_GTPase
NACHT
Motif
Other DBs
NCBI-GeneID:
17289614
NCBI-ProteinID:
XP_005819868
JGI:
Guith1_81905
UniProt:
L1I9J2
LinkDB
All DBs
Position
Unknown
AA seq
158 aa
AA seq
DB search
MTDRKRKIDLGDGGDPKNSRPRDVGTAANPGVNPLTGRQFSQNYYKILEKRLNLPVYEFK
ESFIQTVRENQIVVLVGETGSGKTTQITQFLVDGGYCQRGADGKVRGIACTQPRRVAAMS
VARRVAEEMDVELGQQVGYTIRFEDLTGPNTILRYMTD
NT seq
474 nt
NT seq
+upstream
nt +downstream
nt
atgacggaccgcaagcgtaagatcgacttgggcgacggaggagaccccaagaactccagg
ccgagggacgtgggaacggcggctaacccgggggtgaaccctctgacgggccgccagttc
tcgcagaactactacaagatcttggagaagcgtcttaaccttcctgtgtatgagttcaag
gagagtttcatccagactgtacgcgagaaccagattgtagtgctggttggagagactggg
agtggcaaaacaacgcagatcacgcagttccttgtagatggtggctactgccagagaggg
gcagacggcaaggtcaggggcattgcatgcacacagcctcgaagggtcgctgcaatgagt
gttgcccggcgtgttgctgaggagatggatgttgagctcgggcagcaagtcggttacacc
atccgtttcgaggatttgacaggaccgaacacgatcctcaggtacatgacagac
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integrated database retrieval system