KEGG   Guillardia theta: GUITHDRAFT_81905
Entry
GUITHDRAFT_81905  CDS       T02925                                 
Name
(RefSeq) hypothetical protein
  KO
K12820  pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:5.6.2.6]
Organism
gtt  Guillardia theta
Pathway
gtt03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:gtt00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    GUITHDRAFT_81905
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:gtt03041]
    GUITHDRAFT_81905
   03009 Ribosome biogenesis [BR:gtt03009]
    GUITHDRAFT_81905
Enzymes [BR:gtt01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     GUITHDRAFT_81905
Spliceosome [BR:gtt03041]
 Complex A
  U2 snRNP components
   U2 related factors
    GUITHDRAFT_81905
 Complex B
    GUITHDRAFT_81905
 Complex C
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-SnRNP related factors
    GUITHDRAFT_81905
Ribosome biogenesis [BR:gtt03009]
 Eukaryotic type
  90S particles
   Helicases
    GUITHDRAFT_81905
SSDB
Motif
Pfam: AAA_22 nSTAND3 AAA_19 ATPase ABC_tran SRP54 TsaE TrwB_AAD_bind PhoH AAA_16 AAA_7 2C_adapt AAA_30 DEAD AAA_29 AAA_23 T2SSE NB-ARC AAA_24 TniB RsgA_GTPase NACHT
Other DBs
NCBI-GeneID: 17289614
NCBI-ProteinID: XP_005819868
JGI: Guith1_81905
UniProt: L1I9J2
LinkDB
Position
Unknown
AA seq 158 aa
MTDRKRKIDLGDGGDPKNSRPRDVGTAANPGVNPLTGRQFSQNYYKILEKRLNLPVYEFK
ESFIQTVRENQIVVLVGETGSGKTTQITQFLVDGGYCQRGADGKVRGIACTQPRRVAAMS
VARRVAEEMDVELGQQVGYTIRFEDLTGPNTILRYMTD
NT seq 474 nt   +upstreamnt  +downstreamnt
atgacggaccgcaagcgtaagatcgacttgggcgacggaggagaccccaagaactccagg
ccgagggacgtgggaacggcggctaacccgggggtgaaccctctgacgggccgccagttc
tcgcagaactactacaagatcttggagaagcgtcttaaccttcctgtgtatgagttcaag
gagagtttcatccagactgtacgcgagaaccagattgtagtgctggttggagagactggg
agtggcaaaacaacgcagatcacgcagttccttgtagatggtggctactgccagagaggg
gcagacggcaaggtcaggggcattgcatgcacacagcctcgaagggtcgctgcaatgagt
gttgcccggcgtgttgctgaggagatggatgttgagctcgggcagcaagtcggttacacc
atccgtttcgaggatttgacaggaccgaacacgatcctcaggtacatgacagac

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