Guillardia theta: GUITHDRAFT_83612
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Entry
GUITHDRAFT_83612 CDS
T02925
Name
(RefSeq) hypothetical protein
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
gtt
Guillardia theta
Pathway
gtt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gtt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
GUITHDRAFT_83612
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gtt03041
]
GUITHDRAFT_83612
03009 Ribosome biogenesis [BR:
gtt03009
]
GUITHDRAFT_83612
Enzymes [BR:
gtt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GUITHDRAFT_83612
Spliceosome [BR:
gtt03041
]
Complex A
U1 snRNP components
U1 related factors
GUITHDRAFT_83612
Complex B
GUITHDRAFT_83612
Ribosome biogenesis [BR:
gtt03009
]
Eukaryotic type
Pre-60S particles
Helicases
GUITHDRAFT_83612
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ERCC3_RAD25_C
ResIII
P-loop_SecA
Cas3-like_C_2
Tap-RNA_bind
Rab3-GAP_cat_C
Motif
Other DBs
NCBI-GeneID:
17287587
NCBI-ProteinID:
XP_005817847
JGI:
Guith1_83612
UniProt:
L1I486
LinkDB
All DBs
Position
Unknown
AA seq
464 aa
AA seq
DB search
RDWANQSLSHFEKNFYQEHPAVTALTREEVDDFRREKQIQVSGRDCPKPCRTFEEGSFPD
YILSVVEREYGPNAKPTPVQAQAWPVALSGRDCINIAETGSGKTLAFLLPAIVHINAQPY
LKPGDGPIVLILAPTRELALQIHEARNLYGHSSNIKLSCVYGGAPKGAQASELRRGVEII
IATPGRLIDFLESRTTNLRRVTYLPQIRKIVGQIRPERQTLMFTATWPREVENIARDFMQ
NETVRTVIGSQSLKAVKTVKQFVEVCEDVEKPRKLQRIMERIVDKEGSKIIIFTETKRNA
DSLTRNMRQDGWPALAIHGDKQQAERDWVLQQFKSGACQILVATDVAARGLDIKDVRFVI
NYDMPGCCEDYVHRIGRTGRAGAQGTAYTLYTATNAKTTGRELLKILQENGQEIPQEFVR
LVQTLGGGGGGNRRWGGGGGGGRGFGGDRYSGANSIPLGGARRY
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
agagactgggcaaaccaaagtctttcgcacttcgagaagaacttttatcaggagcatccg
gcagtcactgctttgacccgagaggaagtagatgattttcgtcgagagaagcagatccag
gtgtccggaagagattgccccaaaccgtgccgtacgtttgaagaaggatcatttccggat
tacatcctctctgttgtcgaacgtgaatatggtccaaatgccaagccaacacctgtccag
gcacaggcgtggccagtggctctttcaggccgtgattgcatcaacatagctgagacaggg
tcaggaaagaccctggcgttcctcctccctgcgattgtccatatcaatgctcagccctac
ctcaaaccgggagatggtcctatcgtgctcatccttgctcctactcgcgagctcgccctc
caaattcatgaggcaagaaatctctacgggcacagctccaacatcaagctttcctgtgtt
tacggtggtgctccaaagggagctcaagcatcggaattgcgtcgtggagtcgagattatc
attgcaactcctggacgtctaatcgacttcctggagtctcgtacaacgaacctacgaaga
gtcacttatctccctcaaatcagaaagattgtagggcaaatcaggcctgagaggcaaacg
ctcatgttcactgcaacttggcccagagaagttgagaacatcgcaagagactttatgcag
aatgaaacggttcgcactgtcattggctcccaaagcttgaaggcggtcaagaccgtgaaa
caattcgtagaagtttgtgaagacgtagagaagccacgcaaacttcaaaggatcatggag
cgcatagtcgacaaagagggatcaaagatcatcatctttaccgagacaaagcgtaatgcg
gacagcttgacgcgaaacatgcgacaagacggttggccggcacttgctatccatggggac
aaacaacaggctgagcgcgactgggtgttgcagcaattcaagtctggtgcctgccagatc
ctcgttgcaactgacgtggcggctcgaggcctcgacatcaaggacgtgcgtttcgtgatc
aattatgatatgcccggatgctgtgaagactacgtgcatcgcattgggcgaacagggcgc
gccggagctcagggaacagcgtacaccctgtacacagctacgaatgcaaagacgacaggt
agagagctgttgaagatcctgcaagagaacggacaagagattccgcaggagtttgtgagg
ttggttcaaactttgggtggtggtggtggtggaaaccgtcgatggggcggcggaggcggg
ggaggaagaggtttcggcggcgatcgttactctggtgcgaacagcattcctctgggagga
gcacgacgctattag
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