Guillardia theta: GUITHDRAFT_84932
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Entry
GUITHDRAFT_84932 CDS
T02925
Name
(RefSeq) hypothetical protein
KO
K13126
polyadenylate-binding protein
Organism
gtt
Guillardia theta
Pathway
gtt03015
mRNA surveillance pathway
gtt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gtt00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
GUITHDRAFT_84932
09123 Folding, sorting and degradation
03018 RNA degradation
GUITHDRAFT_84932
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gtt03019
]
GUITHDRAFT_84932
03041 Spliceosome [BR:
gtt03041
]
GUITHDRAFT_84932
Messenger RNA biogenesis [BR:
gtt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
GUITHDRAFT_84932
mRNA cycle factors
Stress granule specific factors
GUITHDRAFT_84932
Spliceosome [BR:
gtt03041
]
Complex C
Other components
Complex C specific factors
GUITHDRAFT_84932
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_10
RRM_5
RRM_7
RRM_3
RRM_occluded
RRM_RdRP1_2
RBD_DEAH11
RRM_Nup35
BRAP2
Motif
Other DBs
NCBI-GeneID:
17308485
NCBI-ProteinID:
XP_005838894
JGI:
Guith1_84932
UniProt:
L1JUD2
LinkDB
All DBs
Position
Unknown
AA seq
616 aa
AA seq
DB search
MATTTAAANATAAAPVTQPPLASASLYVGDLDPNVTEPQLFEVFSVVGPVASIRVCRDAM
TRRSLGYAYVNFHNVVDAERALDTLNYTQIKGKACRIMWKHRDPSIRKSGAGNIFIKNLD
KTVDTRTLHDTFSQFGNILSCKVSMDEHANSRGFGFVQFETAEEANEAISKVNGMLLEDK
RLFVGPFIPRGERESTNGERRFTNVYVKNFPDNVSDDDFRKSFERYGEITSCKIMRKEDG
TSKCFGFVNFKEADDAKKCCEEMNGQKPFGGERDIYAGRAEKESERKEKLKKKYDQIRME
RLKNNQLVNLYIKNLDDTIDDEKLRQTFEQFGTITSAKVMRDKDRPEVSKGFGFVCFAQP
EEATRAVTAMNGQMVGTKPIYVALHQPIEIRRQMQAAQGQRQNLLPRFQMQGMPMPQMMP
FTRTAPPGAQGVFMFPGQMPGQYRQPFNNRQGQYPVQGQQRRQGGANYNAQQQQARGQQQ
QARGQQQQTNARQPKGAVPAQQPQRVPAAPQAVPAQQAAPAPQVPPSAMSKEQLMALLVN
APPAQAKQILGERLYALIQAEQGPLAGKITGMLLEGLDNSELIALIDDAEALRSKIQEAL
AALEAHAQQQQQAAQH
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccaccaccgctgctgccaatgctactgctgctgcccccgtcacgcagcccccc
cttgcttcggcatccctgtatgtcggtgacttggaccctaacgtcacggagccccagctc
ttcgaggttttctccgtcgttggacctgttgcctcaatccgtgtttgccgtgatgctatg
acccgtcgctccctcggatatgcttacgtcaacttccacaatgtcgttgatgccgagcgt
gccctcgacaccttgaactacacccagatcaagggcaaggcttgccgtatcatgtggaag
catcgtgacccgtccatccgtaagtctggagctggaaacatctttatcaagaacttggac
aagaccgtcgacacccgtactcttcacgacactttctcccagttcggcaacatcttgtcc
tgcaaggtttccatggatgagcatgccaactctcgcggctttggtttcgttcagttcgag
actgctgaggaggccaatgaggctatttccaaggtgaacggcatgcttttggaggacaag
cgcctcttcgtgggaccctttatcccccgtggtgagcgtgagtctaccaacggagagcgc
cgcttcaccaacgtctacgtcaagaacttccctgacaacgtgagcgatgatgacttccgc
aagtccttcgagaggtatggagagatcacctcctgcaagatcatgaggaaggaagacggc
acctccaagtgcttcggattcgtcaacttcaaggaggctgatgatgccaagaagtgctgt
gaggagatgaatggccagaagccattcggtggtgagagggatatctacgctggacgtgct
gaaaaggaaagcgagcgcaaggagaagctcaagaagaagtacgatcagatccgtatggag
cgcttgaagaacaaccagctcgtcaacctctacatcaagaatcttgatgacaccatcgat
gatgagaagcttcgccagaccttcgagcagttcggaaccatcacctccgccaaggtgatg
cgtgacaaggatcgccccgaggtttccaagggcttcggtttcgtctgcttcgctcagcct
gaggaggctactcgtgctgtgaccgcgatgaacggacagatggttggcaccaagcccatc
tacgttgcccttcaccagcccatcgagatccgtcgccagatgcaggctgctcagggccag
cgccagaacctccttccaaggttccagatgcagggaatgcctatgccacagatgatgccg
ttcactcgcactgctcctccgggcgctcagggagtgttcatgttcccaggacagatgccg
ggacagtatcgtcagcccttcaacaaccgccagggccagtaccctgtccagggacagcag
cgtcgtcagggtggcgccaactacaacgcccagcagcagcaggctcgtggacagcagcag
caggctcgtggacagcagcagcagaccaacgcccgccagccaaagggcgccgttcctgct
cagcagccacagcgtgttcctgcggcccctcaggccgttcctgctcagcaggctgctccg
gctccacaggttcctccttctgccatgagcaaggagcagcttatggccctcttggtcaat
gctcctccagcacaggccaagcagatcctcggagagcgtctctatgctctcatccaggcg
gagcagggaccccttgctggcaagatcactggaatgctcttggaggggcttgacaactcc
gagctcatcgctctcatcgacgatgctgaggctcttcgcagcaagatccaggaggccttg
gcagccctcgaggcgcacgctcagcagcagcagcaggcggctcagcactaa
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integrated database retrieval system
