KEGG   Guillardia theta: GUITHDRAFT_85230
Entry
GUITHDRAFT_85230  CDS       T02925                                 
Name
(RefSeq) hypothetical protein
  KO
K14407  cleavage stimulation factor subunit 2
Organism
gtt  Guillardia theta
Pathway
gtt03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:gtt00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    GUITHDRAFT_85230
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gtt03019]
    GUITHDRAFT_85230
Messenger RNA biogenesis [BR:gtt03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     GUITHDRAFT_85230
    U7-dependent histone pre-mRNA processing factors
     GUITHDRAFT_85230
SSDB
Motif
Pfam: RRM_1 CSTF2_hinge RRM_7 RRM_10 Spo7_2_N RRM_Rrp7 RBD_DEAH11 Histone_HNS_N
Other DBs
NCBI-GeneID: 17307495
NCBI-ProteinID: XP_005837820
JGI: Guith1_85230
UniProt: L1JRP7
LinkDB
Position
Unknown
AA seq 243 aa
MSGSRGSQASRSVFVGNIPYNATEEQLEDIFRAVGHVVSFRWLVKNSDTGQPKGFGFCEF
RDAQTAESAIRNLNNTEFNGRLLRIDYASSLGEGKSGGGGSGGSNSGASGAKPLMNAHDQ
IMAVVSTMSIEQMYNVMGQLKTICAQNREQARELFNTYPQLSMAVLRMHDLLSKYSSGGP
PPPVGIHSDPLPRGGMSGLSGPGMPPPPQLGGGMGMPGNVPPSAMGQPVGGASVTSGRGG
SGD
NT seq 729 nt   +upstreamnt  +downstreamnt
atgtcgggctcgcgtggaagtcaagccagtcgctcagtctttgtcggaaacatcccgtat
aatgccacagaggagcagctggaggatatcttccgagcagtcggccatgtagtcagcttc
cggtggctggtcaagaactcggacacgggtcaacctaaaggttttggtttctgtgaattt
cgggatgcacaaactgcagagtccgctatcaggaacttgaacaacactgagttcaatgga
cggctgcttcgaattgattatgcgtcaagcttgggtgagggaaaatctggtggcggagga
tcaggagggtcgaactcgggagcaagtggcgccaagccacttatgaatgcacatgatcaa
ataatggctgttgtctcaaccatgtctattgaacagatgtacaatgttatgggtcagctt
aaaacaatttgcgctcaaaacagagagcaagctcgagagctcttcaacacttaccctcag
ctgtccatggctgtgctgcggatgcatgatctgctctccaagtacagcagcggcggcccc
cctccacccgtcggcattcatagcgacccgttgccacgtgggggcatgtccgggcttagt
gggccaggcatgcctcctcccccgcagcttggaggaggcatggggatgccaggaaatgtg
cctccgagtgcgatgggtcagcctgtgggaggagcaagcgtgaccagtgggagaggcggg
agtggggat

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