Guillardia theta: GUITHDRAFT_87651
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Entry
GUITHDRAFT_87651 CDS
T02925
Name
(RefSeq) hypothetical protein
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
gtt
Guillardia theta
Pathway
gtt03022
Basal transcription factors
gtt03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gtt00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
GUITHDRAFT_87651
09124 Replication and repair
03420 Nucleotide excision repair
GUITHDRAFT_87651
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gtt03021
]
GUITHDRAFT_87651
03400 DNA repair and recombination proteins [BR:
gtt03400
]
GUITHDRAFT_87651
Transcription machinery [BR:
gtt03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
GUITHDRAFT_87651
DNA repair and recombination proteins [BR:
gtt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
GUITHDRAFT_87651
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb4
Cupin_6
Motif
Other DBs
NCBI-GeneID:
17300523
NCBI-ProteinID:
XP_005830732
JGI:
Guith1_87651
UniProt:
L1J604
LinkDB
All DBs
Position
Unknown
AA seq
343 aa
AA seq
DB search
MSTKEEEEEREEKGKQQSSELDDLPSSLIVILDLNQASWTESTAKGGPTVIEALESLLTF
LRAFFMLHGGNTVTIIAAHPYGSEFLYQSPALQRSKAHGHQQSGALEMDEIDHRLHEKIV
SLSKSLKSKSSQENSDSSMKCSLLSSAFALAACTVNRISSHKLLRMLPRVLVLTASTELP
SQYIPIMNCIFSMQKANVLIDALVVSDGDCSFLQQAADITNGVYLRPELSKVGSSPGALL
SWMISVFLGDKHTRFLNADSQSRSTLLRLPQAQDVDYRSSCFKTGQLVDVGFVCSVCLSI
FAKCDFFICPTCDSKIALDRPAGAAVNKKRKVAAGAQKGDDTK
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgaaggaggaagaggaggagagggaggagaaggggaagcagcaaagctcagag
ctagatgacttgccgtcctccttgatcgtaatcttagacctcaaccaggcatcatggaca
gagagcacggccaagggaggtccgacagtgattgaagcgctcgaaagtttgttgaccttt
ctgcgggcatttttcatgctccatggaggaaacacagtcactataatcgcagctcatcca
tatggcagtgagttcctctaccaatcgcctgccctgcagagaagcaaggcgcatggacac
cagcagtcaggggccctggagatggacgagatagaccacagactgcacgagaagattgta
tctctttcaaagtcgttgaagtcgaaatcctcccaagaaaactctgactcaagtatgaag
tgctcgctgctgtcgtctgctttcgctctcgcggcctgtactgtcaacagaatctcgtcg
cacaaactgttgagaatgcttccgcgtgtgttggtgttgacagcgagcacggaacttccc
tcgcagtacatccccatcatgaactgcatcttttctatgcagaaagcgaatgtcctcatc
gatgccttggtggtttcagacggagactgctcatttctccagcaagcagctgacatcacc
aatggcgtctacctgcggcctgagctgtccaaagtcggaagctcaccaggagcgctgctc
tcttggatgatctcggtgttcctaggagacaagcacaccaggtttcttaatgcagattcg
cagtcgcggtcaaccttgctccgactgccccaggcgcaggatgttgactatcgttcgtcg
tgcttcaagacaggtcagctggtggatgttggatttgtttgcagcgtttgcctatcaata
tttgccaagtgcgatttcttcatctgtcccacctgtgattcaaagatagcgctggataga
ccggcaggagctgctgtaaacaagaagcgaaaagtagcggccggtgctcagaaaggagac
gatacaaagtga
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integrated database retrieval system
