Guillardia theta: GUITHDRAFT_88039
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Entry
GUITHDRAFT_88039 CDS
T02925
Name
(RefSeq) hypothetical protein
KO
K14793
ribosomal RNA-processing protein 9
Organism
gtt
Guillardia theta
Brite
KEGG Orthology (KO) [BR:
gtt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gtt03009
]
GUITHDRAFT_88039
Ribosome biogenesis [BR:
gtt03009
]
Eukaryotic type
90S particles
Other 90S particles
GUITHDRAFT_88039
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
Beta-prop_THOC3
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
Beta-prop_EML_2
WD40_Gbeta
WDR55
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
EIF3I
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_EML
WD40_MABP1-WDR62_2nd
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_DCAF12
Beta-prop_HPS5
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_WDR41
Beta-prop_VPS8
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
Beta-prop_Vps41
Beta-prop_SPT8
Beta-prop_IFT140_1st
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_ACSF4
PEP5_VPS11_N
Beta-prop_IP5PC_F
Beta-prop_NWD2_C
KNTC1_N
WDR54
Beta-prop_NUP159_NUP214
WD_LRWD1
WD40_like
CPSF_A
TP1
Cytochrom_D1
Beta-prop_LRRK2
Beta-prop_RIC1_2nd
Tricorn_2nd
Motif
Other DBs
NCBI-GeneID:
17299211
NCBI-ProteinID:
XP_005829423
JGI:
Guith1_88039
UniProt:
L1J1P0
LinkDB
All DBs
Position
Unknown
AA seq
449 aa
AA seq
DB search
MAPAKTVKRAGSKRKNEGDNKFSSRKKAAFNDEELSGDDFSAEEEARFESGGEGSEDEFA
LETADETRLRLAKQYLETVTNEVKKIEEDDDADAFNQDAIAHRLQQDIAEAKGKRYKHVA
DHLVGKDIQVSQVLRGHKLSVTSVALAGDDRTLCSAGKEGVVYLWDLESGTKKKIFPDEK
FGKVVNGLAVSQDGQYVAIGGKDSLVHVYDVRQQKLASSFKGHRDAVTCLAFRKGTHQLF
SGSLDRTIKIWNLDEMCYVETLFGHQCQINGIASLLRERCVSVGRDRTMRLWKVMEESQL
IFRGHTHSIDTVAMSNEEFFCGGSQDGGVSLWSVMKKKPTVIRRVAHGSDEFGNPNWISS
VAALNYSDLIASGSCDGLVRLWKCADQNSSLEEVAQLPVKGFVNSLCFSSTGRFLVAGVG
QEHRLGRWKRMGEAKNSIVVLPLSQEDLV
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggcgccggcaaaaactgtgaaacgagcagggagcaagcgtaagaatgaaggggacaat
aaattcagtagcagaaagaaggcagcgttcaacgacgaagagcttagtggtgatgatttc
agcgcggaggaagaagcaagattcgaaagcgggggagaaggcagcgaagatgagtttgca
ttagaaacagcagacgaaacgaggcttcggcttgccaaacagtatcttgaaactgtcact
aacgaggtgaagaagatcgaagaggacgacgacgcagatgccttcaaccaagatgcaatt
gctcatcgtctacagcaagacattgctgaagcaaaggggaagcgctacaaacatgtggca
gatcacttggtgggaaaggatatacaagtctcccaggttcttcgcggtcataagctttca
gtcaccagcgttgcacttgctggagatgacagaactttgtgctcagcaggaaaggaggga
gtggtgtacctgtgggacttggagtcaggaaccaagaagaagatatttccagatgaaaag
tttggcaaggttgtgaacggactagctgtaagtcaagatgggcagtacgtcgcgatcgga
ggaaaggatagcttggttcatgtatatgatgttaggcagcagaagctggcgagcagcttt
aaggggcaccgcgacgctgttacttgcttggccttccgcaagggaactcaccagctgttc
tccggctcgctagacaggacaatcaagatttggaacttagacgagatgtgctatgttgag
acgctgttcgggcaccagtgccaaatcaacgggatcgcctccctgcttcgagaacgctgc
gtgtcagtggggcgagacagaacgatgaggctgtggaaggtgatggaggagtcgcagctc
atcttcaggggccacacccacagcatcgacaccgttgccatgtccaacgaagaattcttc
tgcggaggatcgcaggacgggggcgtgagcttgtggtcagtgatgaagaagaagccgacg
gtgattcgccgggtggctcacggcagcgacgagttcggcaaccccaactggatctcctca
gtcgctgctctcaactacagcgacctcattgcctccggctcctgcgatgggctggtgcgg
ctctggaagtgtgcagatcaaaactcgtcgctggaggaggtggcacagctgcctgtgaaa
ggcttcgtcaactcgctctgcttctcctcaacagggaggttcctggtcgctggcgtcggg
caggagcatcgactcggaaggtggaagagaatgggagaggcaaagaactccatcgtagtt
cttcctttgtcgcaagaagacttggtctga
DBGET
integrated database retrieval system