Guillardia theta: GUITHDRAFT_88396
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Entry
GUITHDRAFT_88396 CDS
T02925
Name
(RefSeq) hypothetical protein
KO
K13182
ATP-dependent RNA helicase DDX39 [EC:
5.6.2.7
]
Organism
gtt
Guillardia theta
Brite
KEGG Orthology (KO) [BR:
gtt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gtt03041
]
GUITHDRAFT_88396
Enzymes [BR:
gtt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GUITHDRAFT_88396
Spliceosome [BR:
gtt03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
GUITHDRAFT_88396
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
17298171
NCBI-ProteinID:
XP_005828474
JGI:
Guith1_88396
UniProt:
L1J003
LinkDB
All DBs
Position
Unknown
AA seq
432 aa
AA seq
DB search
MADEDLPQYDSDSDKEEEAPSARTQQTAGHISTSAASFRDFLLKPELLRAINDCAFEHPS
KVQEEAIPDGLAGHDIVAQAKAGMGKTAVFVTVILERIAADEQSLQALVVVHTRELAYQV
AKEFERFKAYLEGITVQCIYGGVPLPQQEASLTKDKPHIVVGCPGRLKVLVQRKALDLSR
LKIFVIDEVDKVLEKADMRQDVQEIFYTTPKNKQTMCFSATLPPEIKGTVMKFVQKPKEI
LIDMDKLSLHGLSQFYIKLEESQKTRKLTDLMDILEFNQVVIFVRDKRRCHSLNKILQES
KFPSIELHSDMDATERIATYNKFKKFEARILVTTDLGARGLDIERVNIVFNYDFPIEADT
YMHRVGRAGRFGNKGMAISFISTTEDPSGKINDQSIFEKVQARFAVKVEPLPDEIDLSSY
MPKPGVKEQFDE
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaagaccttccccagtatgattctgactctgataaggaggaagaagcacca
tccgctcgtacccagcaaactgcggggcatatttccacgagtgctgcaagcttccgtgat
ttccttcttaagccggaacttttgagagcgatcaacgactgtgccttcgagcatccatct
aaagttcaagaggaggctattccggacggtctagctggacatgatatcgttgcccaagcc
aaagcggggatgggcaagaccgccgtgttcgtcaccgtgatccttgaaaggattgctgcg
gatgagcaatccttgcaagctttggttgtggtgcacaccagggagcttgcataccaggtt
gccaaggaattcgagaggttcaaggcctatcttgagggtatcacagtccagtgcatttac
ggaggtgttcctctccctcagcaggaagcaagcctcacaaaggacaagccgcatattgtg
gttggatgtccgggacgactcaaggtccttgtccagagaaaggccctggacttgtcgaga
ctgaagatttttgtcatcgatgaggttgacaaggttcttgagaaagctgacatgcgtcaa
gacgttcaagagatcttttacactacccccaagaacaagcagaccatgtgcttctcggca
actcttcctcccgagatcaaaggaacagtcatgaagttcgtccaaaaaccgaaggaaatc
ctgattgatatggacaaactcagcttgcacggcctgagccaattctacatcaagctggaa
gagtctcagaagacgcgcaaactgactgatctcatggacattcttgagttcaaccaagtt
gttattttcgttcgtgacaagcgaaggtgtcactctctgaacaaaatcctccaagaatcc
aagtttccatccatcgaattgcactcagacatggatgccactgagcgtattgcgacatac
aacaagttcaagaagttcgaggctcgcatcctggtcacaacagaccttggtgcacgtggc
ctggatatcgagagggtgaacatcgttttcaactatgacttccccatcgaggcagacacc
tacatgcatcgcgttggtcgtgcaggccgttttggtaacaagggtatggcgatcagcttc
atctcgaccaccgaagatccctctggcaagatcaacgatcaatccatcttcgagaaggtt
caagcacgcttcgctgtgaaggtggaacctctgcctgatgagatcgatctctcgtcgtac
atgcctaagccaggcgtgaaggagcaatttgatgagtaa
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