Guillardia theta: GUITHDRAFT_90320
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Entry
GUITHDRAFT_90320 CDS
T02925
Name
(RefSeq) hypothetical protein
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
gtt
Guillardia theta
Brite
KEGG Orthology (KO) [BR:
gtt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gtt03019
]
GUITHDRAFT_90320
03041 Spliceosome [BR:
gtt03041
]
GUITHDRAFT_90320
03036 Chromosome and associated proteins [BR:
gtt03036
]
GUITHDRAFT_90320
Enzymes [BR:
gtt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GUITHDRAFT_90320
Messenger RNA biogenesis [BR:
gtt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
GUITHDRAFT_90320
mRNA cycle factors
Common to processing body (P body) and stress granule
GUITHDRAFT_90320
Spliceosome [BR:
gtt03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
GUITHDRAFT_90320
Chromosome and associated proteins [BR:
gtt03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
GUITHDRAFT_90320
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
HEM4
P-loop_SecA
ResIII
Cas3-like_C_2
TMEM119
Motif
Other DBs
NCBI-GeneID:
17291953
NCBI-ProteinID:
XP_005822233
JGI:
Guith1_90320
UniProt:
L1IG85
LinkDB
All DBs
Position
Unknown
AA seq
564 aa
AA seq
DB search
MSRREEEEILKLFESSKNATGINFDKYEDIPVEVAPSMEKIGVRSIETFQDDLGLAGPIM
DNINRAGYKKPTPVQKFALPILVANFDIMACAQTGSGKTAAFLFPMISVILKAPPAPPAG
NGRSSYPRGLILAPTRELVQQIFDEARKFCYKTGLRCAVAYGGGENIRDQLREVERGADI
IAAAPGRLVDFMERGKVKLCDVMFLCLDEADRMLDMGFEPQIRRIVEDSDMPGNDMRQTL
LFSATFPREVQRLAQDFLRRDFATLTVGRVGAATDTIVQKILFARDNQEKCGMLVDVLLS
QGVEGERVLVFVATKREADMLEEFLYREGFPATSIHGDRSQPEREMALRSFRAGKEKVLV
ATDVCARGIDIPNVAMVVNYDMPNCIEDYVHRIGRTGRAGNDGQATSFITPKDARLAKDL
EKILVDARQEVPPFLDEMARSARFGSGGGYGGRGVEGGEEEEEEGAMDLAGVGETVGEIV
EEETAEEEIVVVEEAARGGQMTHGITERDNMVVALGVMYVLSYLVLQRLFELVAFPREEA
ERVVGEWSSAHVQGLCYVSWSNAC
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgagcaggagagaggaagaagagatcctcaaactttttgagtcttccaagaatgcaacg
gggattaacttcgacaagtatgaagatattccagtagaggtcgcgccatcgatggagaag
atcggtgtcaggagcatagaaaccttccaggatgaccttggtttggctggacctatcatg
gacaacatcaacagggctggttacaagaaaccgacccctgttcagaagtttgcattgcct
attctagtcgccaacttcgatatcatggcgtgcgcccaaacgggctcgggcaagactgca
gctttcctctttccgatgatctcggtgatcttgaaagccccacctgcgccgccagcgggc
aatggaaggtcgtcgtacccccgcggactcattcttgcaccgacccgcgagcttgttcag
caaattttcgatgaagcccggaagttctgctataagactggcctcagatgcgcagtagcg
tatggtggcggagagaacatccgtgaccagctgagggaagttgagcgtggagctgacatc
attgctgctgctcctggacgccttgtagacttcatggagagaggcaaagtcaagttatgc
gacgtcatgttcttgtgccttgacgaagctgatcgaatgctggacatgggttttgaacct
cagatccgtcgcatcgtggaagattctgatatgcctggaaacgacatgcgtcagactctc
ctcttctcggccaccttcccgcgcgaggtccagcgccttgcacaggatttcttgcgccgt
gactttgctactttgaccgttgggagggttggtgctgcaacagacaccatcgtccagaag
attctgtttgctcgtgacaatcaggagaagtgcgggatgttggtagatgttctgctttcg
caaggagtagaaggagagcgtgttctggtcttcgtcgcaacgaagcgtgaagccgacatg
ctcgaggagttcttgtaccgtgagggctttcctgccacttccatccatggagatcgcagc
caacccgagcgtgaaatggctcttcgctccttcagggcaggcaaggagaaagttctggtt
gcgaccgacgtttgcgcccgtggcattgatatccccaacgttgctatggtggtcaactac
gacatgccaaactgcatcgaagattacgttcaccgtattggccgtacgggacgtgctgga
aacgatgggcaagcaacttccttcatcactcccaaggatgctcgcttggccaaggatctt
gagaaaatcttggttgacgcccgacaagaagttccaccattccttgacgagatggcaaga
agtgctcgttttggcagcgggggaggatacggaggcagaggggtggaaggtggggaggag
gaggaggaggagggcgctatggatctggcgggggttggggagaccgttggggagatcgtg
gaggaggagaccgcggaggaggagatcgtggtggtggaggaggcggctcgaggtggacag
atgacgcatgggataactgagagggacaacatggttgttgccctgggtgtaatgtacgtt
ctttcgtatttggtgctgcaaagattgtttgagttggtggcgtttccgcgcgaagaggcg
gagagagtggttggcgagtggagcagcgcacacgtgcaggggctttgctatgtcagctgg
agcaacgcttgttga
DBGET
integrated database retrieval system
