Guillardia theta: GUITHDRAFT_90479
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Entry
GUITHDRAFT_90479 CDS
T02925
Name
(RefSeq) hypothetical protein
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
gtt
Guillardia theta
Pathway
gtt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gtt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
GUITHDRAFT_90479
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gtt03041
]
GUITHDRAFT_90479
03009 Ribosome biogenesis [BR:
gtt03009
]
GUITHDRAFT_90479
Enzymes [BR:
gtt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GUITHDRAFT_90479
Spliceosome [BR:
gtt03041
]
Complex A
U1 snRNP components
U1 related factors
GUITHDRAFT_90479
Complex B
GUITHDRAFT_90479
Ribosome biogenesis [BR:
gtt03009
]
Eukaryotic type
Pre-60S particles
Helicases
GUITHDRAFT_90479
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Nitroreductase
DUF7492
Motif
Other DBs
NCBI-GeneID:
17291199
NCBI-ProteinID:
XP_005821420
JGI:
Guith1_90479
UniProt:
L1IF11
LinkDB
All DBs
Position
Unknown
AA seq
558 aa
AA seq
DB search
MPSIAPRFDADVLHKKSKSSKVKTFASDSEDEKVEESRAKESRKEKKEKDAEAKRKEKRK
KVSSDSSESSDSDAPASKKLKSDEADQPTRLSVEEFRRKLEIKVAGSDCPAPFQTFEDAS
LPPELLEAVRQQGFKAPSAIQSQCWPLAMAGKDLIAIAKTGSGKTCGFLFPAFQLIKRSV
SLQCRRGDGPVALVLAPTRELAIQIEQECVKFAKTSKIVAACAYGGMPKGPQIRSIMAGL
HVLIATPGRLNDFLKMNNPPVAPLNRLKYLVFDEADRMLDMGFEPQIKEVLGAIPKECVY
QCLMFTATWPKAQLATSYLKNPIQITIGTSGDQLTANKDVKQIVYNTAAEDKDDKLVEIL
NVIKEEGDMEDKRIIIFANKKSMCERIMRGLKKFGWNSEAIHGDKDQWQRSQSLANFTSG
KTRIMIATDVAARGLDVKGVSHVINYDFPGNGAEDWVHRVGRTGRAGASGTAYTFFDERA
DRKSARELCSVLKSAQQEVPDWLSSIASRARGGPGKSRWGSRPGGGGGGGGRGRAPGGRR
GGYGGGGGGGGRRQNGRW
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgcccagcattgccccacgcttcgatgcggatgttctccacaagaagtccaagtcttcg
aaagtgaagaccttcgcctctgattctgaggacgagaaagtcgaggaatctcgcgcgaag
gagtcacggaaggagaagaaggagaaggacgcggaagcgaagaggaaggaaaagaggaag
aaggtctcttctgactcgtcggagtcgagcgacagcgatgcccctgcgtccaagaagctc
aagtcagacgaggcagaccagccaacgcgtctcagcgtcgaagagttcaggaggaagctc
gagatcaaagtcgcaggaagcgactgcccggctcccttccagaccttcgaggacgcgtct
ctccctccagagctccttgaggcagtcaggcagcagggcttcaaggcccccagcgcgatt
cagagtcagtgctggccgctggcgatggcaggaaaggatctgatcgccattgccaagacg
gggagcggaaagacctgcgggtttttgttccctgccttccagctcatcaagcgctctgtc
tcgctccagtgccgccgaggtgatggccctgtcgctctcgtgctggcgccgacgagagaa
cttgcgatccagattgagcaggagtgcgtgaagttcgccaagacctccaagatcgtcgcc
gcatgcgcgtatggtgggatgcccaagggtccgcagatccgctcgatcatggcaggtctt
cacgtgctgatcgccactccagggcgcttgaatgacttcctcaagatgaacaatcctccc
gttgctccgttgaacagactgaaatatcttgttttcgacgaggcagatcgcatgctcgac
atggggtttgaaccgcagatcaaggaagtgctcggtgcaatccccaaggagtgtgtctat
cagtgcctcatgttcaccgctacttggccgaaagcccaactcgccacatcttatctcaag
aatccgattcagatcacaatcggaacctcaggggaccagctcactgccaacaaagatgtc
aagcagatcgtgtacaacaccgcggccgaggacaaggatgacaagttggtggagattctc
aacgtgatcaaggaagagggagacatggaggacaagcgaattatcatctttgccaacaag
aagagcatgtgcgagagaattatgcgcggcttgaagaagtttggatggaattcggaggca
attcatggggataaggatcagtggcagcgcagtcagtcgcttgctaacttcaccagtggc
aagacacgaatcatgatcgcaaccgacgtcgctgctcgaggattggacgtgaagggggtg
tcgcacgttatcaactatgacttccccggcaacggagccgaggattgggttcaccgtgtt
gggcgcactgggagggctggagcaagtgggactgcctacaccttctttgatgaaagagcc
gacaggaagagcgcacgtgaactctgctctgtgctcaaaagcgcccagcaagaagttcct
gactggttgtcttccattgcaagccgcgcaaggggtggtccggggaagtctcgatggggc
tcgcgcccaggaggaggaggaggaggaggaggcagaggacgggcgccgggaggaaggcgt
ggaggatacggaggaggaggaggaggaggagggaggaggcagaacggaaggtggtga
DBGET
integrated database retrieval system
